Noteable additions:

- `redefines-builtin-id` forbid variable names that shadow go builtins
- `empty-lines` remove unnecessary empty lines that `gofumpt` does not
remove for some reason
- `superfluous-else` eliminate more superfluous `else` branches

Rules are also sorted alphabetically and I cleaned up various parts of
`.golangci.yml`.

also bleve did match on fuzzy search and the other way around. this also fix that bug.

similar to how it's already done for the issue_indexer


---
*Sponsored by Kithara Software GmbH*

meilisearch does not have an search option to contorl fuzzynes per query
right now:
 - https://github.com/meilisearch/meilisearch/issues/1192
 - https://github.com/orgs/meilisearch/discussions/377
 - https://github.com/meilisearch/meilisearch/discussions/1096

so we have to create a workaround by post-filter the search result in
gitea until this is addressed.

For future works I added an option in backend only atm, to enable
fuzzynes for issue indexer too.
And also refactored the code so the fuzzy option is equal in logic to
code indexer


---
*Sponsored by Kithara Software GmbH*

The `ToUTF8*` functions were stripping BOM, while BOM is actually valid
in UTF8, so the stripping must be optional depending on use case. This
does:

- Add a options struct to all `ToUTF8*` functions, that by default will
strip BOM to preserve existing behaviour
- Remove `ToUTF8` function, it was dead code
- Rename `ToUTF8WithErr` to `ToUTF8`
- Preserve BOM in Monaco Editor
- Remove a unnecessary newline in the textarea value. Browsers did
ignore it, it seems but it's better not to rely on this behaviour.

Fixes: https://github.com/go-gitea/gitea/issues/28743
Related: https://github.com/go-gitea/gitea/issues/6716 which seems to
have once introduced a mechanism that strips and re-adds the BOM, but
from what I can tell, this mechanism was removed at some point after
that PR.

Fix #24662.

Replace #24822 and #25708 (although it has been merged)


## Background

In the past, Gitea supported issue searching with a keyword and
conditions in a less efficient way. It worked by searching for issues
with the keyword and obtaining limited IDs (as it is heavy to get all)
on the indexer (bleve/elasticsearch/meilisearch), and then querying with
conditions on the database to find a subset of the found IDs. This is
why the results could be incomplete.

To solve this issue, we need to store all fields that could be used as
conditions in the indexer and support both keyword and additional
conditions when searching with the indexer.

## Major changes

- Redefine `IndexerData` to include all fields that could be used as
filter conditions.
- Refactor `Search(ctx context.Context, kw string, repoIDs []int64,
limit, start int, state string)` to `Search(ctx context.Context, options
*SearchOptions)`, so it supports more conditions now.
- Change the data type stored in `issueIndexerQueue`. Use
`IndexerMetadata` instead of `IndexerData` in case the data has been
updated while it is in the queue. This also reduces the storage size of
the queue.
- Enhance searching with Bleve/Elasticsearch/Meilisearch, make them
fully support `SearchOptions`. Also, update the data versions.
- Keep most logic of database indexer, but remove
`issues.SearchIssueIDsByKeyword` in `models` to avoid confusion where is
the entry point to search issues.
- Start a Meilisearch instance to test it in unit tests.
- Add unit tests with almost full coverage to test
Bleve/Elasticsearch/Meilisearch indexer.

---------

Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>

Result of running `perl -p -i -e 's#interface\{\}#any#g' **/*` and `make fmt`.

Basically the same [as golang did](2580d0e08d).

Refactor `modules/indexer` to make it more maintainable. And it can be
easier to support more features. I'm trying to solve some of issue
searching, this is a precursor to making functional changes.

Current supported engines and the index versions:

| engines | issues | code |
| - | - | - |
| db | Just a wrapper for database queries, doesn't need version | - |
| bleve | The version of index is **2** | The version of index is **6**
|
| elasticsearch | The old index has no version, will be treated as
version **0** in this PR | The version of index is **1** |
| meilisearch | The old index has no version, will be treated as version
**0** in this PR | - |


## Changes

### Split

Splited it into mutiple packages

```text
indexer
├── internal
│   ├── bleve
│   ├── db
│   ├── elasticsearch
│   └── meilisearch
├── code
│   ├── bleve
│   ├── elasticsearch
│   └── internal
└── issues
    ├── bleve
    ├── db
    ├── elasticsearch
    ├── internal
    └── meilisearch
```

- `indexer/interanal`: Internal shared package for indexer.
- `indexer/interanal/[engine]`: Internal shared package for each engine
(bleve/db/elasticsearch/meilisearch).
- `indexer/code`: Implementations for code indexer.
- `indexer/code/internal`: Internal shared package for code indexer.
- `indexer/code/[engine]`: Implementation via each engine for code
indexer.
- `indexer/issues`: Implementations for issues indexer.

### Deduplication

- Combine `Init/Ping/Close` for code indexer and issues indexer.
- ~Combine `issues.indexerHolder` and `code.wrappedIndexer` to
`internal.IndexHolder`.~ Remove it, use dummy indexer instead when the
indexer is not ready.
- Duplicate two copies of creating ES clients.
- Duplicate two copies of `indexerID()`.


### Enhancement

- [x] Support index version for elasticsearch issues indexer, the old
index without version will be treated as version 0.
- [x] Fix spell of `elastic_search/ElasticSearch`, it should be
`Elasticsearch`.
- [x] Improve versioning of ES index. We don't need `Aliases`:
- Gitea does't need aliases for "Zero Downtime" because it never delete
old indexes.
- The old code of issues indexer uses the orignal name to create issue
index, so it's tricky to convert it to an alias.
- [x] Support index version for meilisearch issues indexer, the old
index without version will be treated as version 0.
- [x] Do "ping" only when `Ping` has been called, don't ping
periodically and cache the status.
- [x] Support the context parameter whenever possible.
- [x] Fix outdated example config.
- [x] Give up the requeue logic of issues indexer: When indexing fails,
call Ping to check if it was caused by the engine being unavailable, and
only requeue the task if the engine is unavailable.
- It is fragile and tricky, could cause data losing (It did happen when
I was doing some tests for this PR). And it works for ES only.
- Just always requeue the failed task, if it caused by bad data, it's a
bug of Gitea which should be fixed.

---------

Co-authored-by: Giteabot <teabot@gitea.io>

# ⚠️ Breaking

Many deprecated queue config options are removed (actually, they should
have been removed in 1.18/1.19).

If you see the fatal message when starting Gitea: "Please update your
app.ini to remove deprecated config options", please follow the error
messages to remove these options from your app.ini.

Example:

```
2023/05/06 19:39:22 [E] Removed queue option: `[indexer].ISSUE_INDEXER_QUEUE_TYPE`. Use new options in `[queue.issue_indexer]`
2023/05/06 19:39:22 [E] Removed queue option: `[indexer].UPDATE_BUFFER_LEN`. Use new options in `[queue.issue_indexer]`
2023/05/06 19:39:22 [F] Please update your app.ini to remove deprecated config options
```

Many options in `[queue]` are are dropped, including:
`WRAP_IF_NECESSARY`, `MAX_ATTEMPTS`, `TIMEOUT`, `WORKERS`,
`BLOCK_TIMEOUT`, `BOOST_TIMEOUT`, `BOOST_WORKERS`, they can be removed
from app.ini.

# The problem

The old queue package has some legacy problems:

* complexity: I doubt few people could tell how it works.
* maintainability: Too many channels and mutex/cond are mixed together,
too many different structs/interfaces depends each other.
* stability: due to the complexity & maintainability, sometimes there
are strange bugs and difficult to debug, and some code doesn't have test
(indeed some code is difficult to test because a lot of things are mixed
together).
* general applicability: although it is called "queue", its behavior is
not a well-known queue.
* scalability: it doesn't seem easy to make it work with a cluster
without breaking its behaviors.

It came from some very old code to "avoid breaking", however, its
technical debt is too heavy now. It's a good time to introduce a better
"queue" package.

# The new queue package

It keeps using old config and concept as much as possible.

* It only contains two major kinds of concepts:
    * The "base queue": channel, levelqueue, redis
* They have the same abstraction, the same interface, and they are
tested by the same testing code.
* The "WokerPoolQueue", it uses the "base queue" to provide "worker
pool" function, calls the "handler" to process the data in the base
queue.
* The new code doesn't do "PushBack"
* Think about a queue with many workers, the "PushBack" can't guarantee
the order for re-queued unhandled items, so in new code it just does
"normal push"
* The new code doesn't do "pause/resume"
* The "pause/resume" was designed to handle some handler's failure: eg:
document indexer (elasticsearch) is down
* If a queue is paused for long time, either the producers blocks or the
new items are dropped.
* The new code doesn't do such "pause/resume" trick, it's not a common
queue's behavior and it doesn't help much.
* If there are unhandled items, the "push" function just blocks for a
few seconds and then re-queue them and retry.
* The new code doesn't do "worker booster"
* Gitea's queue's handlers are light functions, the cost is only the
go-routine, so it doesn't make sense to "boost" them.
* The new code only use "max worker number" to limit the concurrent
workers.
* The new "Push" never blocks forever
* Instead of creating more and more blocking goroutines, return an error
is more friendly to the server and to the end user.

There are more details in code comments: eg: the "Flush" problem, the
strange "code.index" hanging problem, the "immediate" queue problem.

Almost ready for review.

TODO:

* [x] add some necessary comments during review
* [x] add some more tests if necessary
* [x] update documents and config options
* [x] test max worker / active worker
* [x] re-run the CI tasks to see whether any test is flaky
* [x] improve the `handleOldLengthConfiguration` to provide more
friendly messages
* [x] fine tune default config values (eg: length?)

## Code coverage:

![image](https://user-images.githubusercontent.com/2114189/236620635-55576955-f95d-4810-b12f-879026a3afdf.png)

Fixes #22714 
### Changes:
1. Add a token filter which named "camelCase" between custom unicode
token filter and "to_lower" token filter when add custom analyzer.

### Notice:
If users want this feature to work, they should delete folder under
{giteaPath}/data/indexers and restart application. Then application will
create a new IndexMapping.

### Screenshots:

![image](https://user-images.githubusercontent.com/33891828/217715692-c18c41f2-57a1-4727-861c-470935c8e0c8.png)

### Others:
I originally attempted to give users the ability to configure the
"token_filters" in the "app.ini" file. But I found that if users does
not strictly follow a right order to register "token_filters", they
won't get the expected results. I think it is difficult to ask users to
do this. So I finally give up this idea.

---------

Co-authored-by: Jason Song <i@wolfogre.com>
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>

Change all license headers to comply with REUSE specification.

Fix #16132

Co-authored-by: flynnnnnnnnnn <flynnnnnnnnnn@github>
Co-authored-by: John Olheiser <john.olheiser@gmail.com>

Found using
`find . -type f -name '*.go' -print -exec vim {} -c
':%s/fmt\.Errorf(\(.*\)%v\(.*\)err/fmt.Errorf(\1%w\2err/g' -c ':wq' \;`

Co-authored-by: 6543 <6543@obermui.de>
Co-authored-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: wxiaoguang <wxiaoguang@gmail.com>

Follow #21464

Make all git command arguments strictly safe. Most changes are one-to-one replacing, keep all existing logic.

Add nakedret, unconvert, wastedassign, stylecheck and nolintlint linters to improve code readability

- nakedret - https://github.com/alexkohler/nakedret - nakedret is a Go static analysis tool to find naked returns in functions greater than a specified function length.
- unconvert - https://github.com/mdempsky/unconvert - Remove unnecessary type conversions
- wastedassign - https://github.com/sanposhiho/wastedassign -  wastedassign finds wasted assignment statements.
- notlintlint -  Reports ill-formed or insufficient nolint directives
- stylecheck - https://staticcheck.io/docs/checks/#ST - keep style consistent
  - excluded: [ST1003 - Poorly chosen identifier](https://staticcheck.io/docs/checks/#ST1003) and [ST1005 - Incorrectly formatted error string](https://staticcheck.io/docs/checks/#ST1005)

Follows #19266, #8553, Close #18553, now there are only three `Run..(&RunOpts{})` functions.
 * before: `stdout, err := RunInDir(path)`
 * now: `stdout, _, err := RunStdString(&git.RunOpts{Dir:path})`

We can't depend on `latest` version of gofumpt because the output will
not be stable across versions. Lock it down to the latest version
released yesterday and run it again.

* Handle keyword search error when issue indexer service is not available

* Implement automatic disabling and resume of code indexer queue

* gofumpt -w -l .

* gofumpt -w -l -extra .

* Add linter

* manual fix

* change make fmt

This PR continues the work in #17125 by progressively ensuring that git
commands run within the request context.

This now means that the if there is a git repo already open in the context it will be used instead of reopening it.

Signed-off-by: Andrew Thornton <art27@cantab.net>

This PR contains multiple fixes. The most important of which is:

* Prevent hang in git cat-file if the repository is not a valid repository 
    
    Unfortunately it appears that if git cat-file is run in an invalid
    repository it will hang until stdin is closed. This will result in
    deadlocked /pulls pages and dangling git cat-file calls if a broken
    repository is tried to be reviewed or pulls exists for a broken
    repository.

    Fix #14734
    Fix #9271
    Fix #16113

Otherwise there are a few small other fixes included which this PR was initially intending to fix:

* Fix panic on partial compares due to missing PullRequestWorkInProgressPrefixes
* Fix links on pulls pages  due to regression from #17551 - by making most /issues routes match /pulls too - Fix #17983
* Fix links on feeds pages due to another regression from #17551 but also fix issue with syncing tags - Fix #17943
* Add missing locale entries for oauth group claims
* Prevent NPEs if ColorFormat is called on nil users, repos or teams.

* Some refactors related repository model

* Move more methods out of repository

* Move repository into models/repo

* Fix test

* Fix test

* some improvements

* Remove unnecessary function

This PR registers requests with the process manager and manages hierarchy within the processes.

Git repos are then associated with a context, (usually the request's context) - with sub commands using this context as their base context.

Signed-off-by: Andrew Thornton <art27@cantab.net>

* Fix nil checking on typed interface

- Partially resoles #17596
- Resolves SA4023 errors.
- Ensure correctly that typed interface are nil.

* Remove unnecessary code

`NewBleveIndexer` will never return nil, even on errors.

* Patch `NewBleveIndexer`

* Fix low-level functions

* Remove deadcode

* Fix GetSession

* Close Elastic search when err isn't nil

* Update elastic_search.go

Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
Co-authored-by: wxiaoguang <wxiaoguang@gmail.com>

The io/ioutil package has been deprecated as of Go 1.16, see
https://golang.org/doc/go1.16#ioutil. This commit replaces the existing
io/ioutil functions with their new definitions in io and os packages.

Signed-off-by: Eng Zer Jun <engzerjun@gmail.com>

Co-authored-by: techknowlogick <techknowlogick@gitea.io>

* Fix data race in bleve indexer

* Improve get last commit using git log --name-status

git log --name-status -c provides information about the diff between a
commit and its parents. Using this and adjusting the algorithm to use
the first change to a path allows for a much faster generation of commit
info.

There is a subtle change in the results generated but this will cause
the results to more closely match those from elsewhere.

Signed-off-by: Andrew Thornton <art27@cantab.net>

Co-authored-by: 6543 <6543@obermui.de>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>
Co-authored-by: Lauris BH <lauris@nix.lv>

* Added type sniffer.

* Switched content detection from base to typesniffer.

* Added GuessContentType to Blob.

* Moved image info logic to client.
Added support for SVG images in diff.

* Restore old blocked svg behaviour.

* Added missing image formats.

* Execute image diff only when container is visible.

* add margin to spinner

* improve BIN tag on image diffs

* Default to render view.

* Show image diff on incomplete diff.

Co-authored-by: silverwind <me@silverwind.io>
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
Co-authored-by: Lauris BH <lauris@nix.lv>

Use common git cat-file --batch and git cat-file --batch-check to
significantly reduce calls to git.
    
Signed-off-by: Andrew Thornton <art27@cantab.net>

`enry.IsVendor` is kinda slow as it simply iterates across all regexps.
This PR ajdusts the regexps to combine them to make this process a
little quicker.

Related #15143

Signed-off-by: Andrew Thornton <art27@cantab.net>

* Extract out the common cat-file batch calls

Signed-off-by: Andrew Thornton <art27@cantab.net>

* Move bleve and elastic indexers to use a common cat-file --batch when indexing

Signed-off-by: Andrew Thornton <art27@cantab.net>

* move catfilebatch to batch_reader and rename to batch_reader.go

Signed-off-by: Andrew Thornton <art27@cantab.net>

Co-authored-by: 6543 <6543@obermui.de>
Co-authored-by: Lauris BH <lauris@nix.lv>

* Reduce calls to git cat-file -s

There are multiple places where there are repeated calls to git cat-file
-s due to the blobs not being created with their size.

Through judicious use of git ls-tree -l and slight adjustments to the
indexer code we can avoid a lot of these calls.

* simplify by always expecting the long format

* Also always set the sized field and tell the indexer the update is sized

* feat: add type query parameters for specifying precise search

* feat: add select dropdown in search box

Co-authored-by: Lauris BH <lauris@nix.lv>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>

* Upgrade blevesearch dependency to v2.0.1

* Update rupture to v1.0.0

* Fix test

* Support elastic search for code search

* Finished elastic search implementation and add some tests

* Enable test on drone and added docs

* Add new fields to elastic search

* Fix bug

* remove unused changes

* Use indexer alias to keep the gitea indexer version

* Improve codes

* Some code improvements

* The real indexer name changed to xxx.v1

Co-authored-by: zeripath <art27@cantab.net>

Replace all calls to os.Remove/os.RemoveAll by retrying util.Remove/util.RemoveAll and remove circular dependencies from util.

Fix #12339

Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: silverwind <me@silverwind.io>

Move langauge detection to separate module to be more reusable

Add option to disable vendored file exclusion from file search

Allways show all language stats for search

* Implementation for calculating language statistics

Impement saving code language statistics to database

Implement rendering langauge stats

Add primary laguage to show in repository list

Implement repository stats indexer queue

Add indexer test

Refactor to use queue module

* Do not timeout for queues

* Refactor code indexer

* fix test

* fix test

* refactor code indexer

* fix import

* improve code

* fix typo

* fix test and make code clean

* fix lint

* Change graceful to use a singleton obtained through GetManager instead of a global.
* Graceful: Make TestPullRequests shutdownable
* Graceful: Make the cron tasks graceful
* Graceful: AddTestPullRequest run in graceful ctx
* Graceful: SyncMirrors shutdown
* Graceful: SetDefaultContext for Xorm to be HammerContext
* Avoid starting graceful for migrate commands and checkout
* Graceful: DeliverHooks now can be shutdown
* Fix multiple syncing errors in modules/sync/UniqueQueue &  Make UniqueQueue closable
* Begin the process of making the repo indexer shutdown gracefully

* move code indexer related code to a new package

* fix lint

* fix tests

* fix fmt

* GetMaxID support interface parameter

* Graceful Shutdown for windows and others

Restructures modules/graceful, adding shutdown for windows, removing and
replacing the old minwinsvc code.

Creates a new waitGroup - terminate which allows for goroutines to
finish up after the shutdown of the servers.

Shutdown and terminate hooks are added for goroutines.

* Remove unused functions - these can be added in a different PR

* Add startup timeout functionality

* Document STARTUP_TIMEOUT

* Prevent deadlock in indexer initialisation during graceful restart

* Move from gracehttp to our own service to add graceful ssh

* Add timeout for start of indexers and make hammer time configurable

* Fix issue with re-initialization in indexer during tests

* move the code to detect use of closed to graceful

* Handle logs gracefully - add a pid suffix just before restart

* Move to using a cond and a holder for indexers

* use time.Since

* Add some comments and attribution

* update modules.txt

* Use zero to disable timeout

* Move RestartProcess to its own file

* Add cleanup routine

* Restrict repository indexing by file extension

* Use REPO_EXTENSIONS_LIST_INCLUDE instead of REPO_EXTENSIONS_LIST_EXCLUDE and have a more flexible extension pattern

* Corrected to pass lint gosimple

* Add wildcard support to REPO_INDEXER_EXTENSIONS

* This reverts commit 72a650c8e4.

* Add wildcard support to REPO_INDEXER_EXTENSIONS (no make vendor)

* Simplify isIndexable() for better clarity

* Add gobwas/glob to vendors

* manually set appengine new release

* Implement better REPO_INDEXER_INCLUDE and REPO_INDEXER_EXCLUDE

* Add unit and integration tests

* Update app.ini.sample and reword config-cheat-sheet

* Add doc page and correct app.ini.sample

* Some polish on the doc

* Simplify code as suggested by @lafriks