Proof of concept #1026

+ Update tika
+ Pull in Tika parsers
+ Remove chicken and egg scenario for FilestoreManager vs
RepositoryManager

build.moxie

@@ -178,7 +178,8 @@ dependencies:
 - compile 'commons-codec:commons-codec:1.7' :war
 - compile 'redis.clients:jedis:2.6.2' :war
 - compile 'ro.fortsoft.pf4j:pf4j:0.9.0' :war
-- compile 'org.apache.tika:tika-core:1.5' :war
+- compile 'org.apache.tika:tika-core:1.12' :war
+- compile 'org.apache.tika:tika-parsers:1.12' :war
 - compile 'org.jsoup:jsoup:1.7.3' :war
 - test 'junit'
 # Dependencies for Selenium web page testing

src/main/java/com/gitblit/FederationClient.java

@@ -98,7 +98,7 @@ public class FederationClient {
 		RuntimeManager runtime = new RuntimeManager(settings, xssFilter, baseFolder).start();
 		NoopNotificationManager notifications = new NoopNotificationManager().start();
 		UserManager users = new UserManager(runtime, null).start();
-		RepositoryManager repositories = new RepositoryManager(runtime, null, users).start();
+		RepositoryManager repositories = new RepositoryManager(runtime, null, users, null).start();
 		FederationManager federation = new FederationManager(runtime, notifications, repositories).start();
 		IGitblit gitblit = new GitblitManager(null, null, runtime, null, notifications, users, null, repositories, null, federation, null);
 

src/main/java/com/gitblit/MigrateTickets.java

@@ -138,7 +138,7 @@ public class MigrateTickets {
 
 		XssFilter xssFilter = new AllowXssFilter();
 		IRuntimeManager runtimeManager = new RuntimeManager(settings, xssFilter, baseFolder).start();
-		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, null, null).start();
+		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, null, null, null).start();
 
 		String inputServiceName = settings.getString(Keys.tickets.service, BranchTicketService.class.getSimpleName());
 		if (StringUtils.isEmpty(inputServiceName)) {

src/main/java/com/gitblit/ReindexTickets.java

@@ -130,7 +130,7 @@ public class ReindexTickets {
 
 		XssFilter xssFilter = new AllowXssFilter();
 		IRuntimeManager runtimeManager = new RuntimeManager(settings, xssFilter, baseFolder).start();
-		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, null, null).start();
+		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, null, null, null).start();
 
 		String serviceName = settings.getString(Keys.tickets.service, BranchTicketService.class.getSimpleName());
 		if (StringUtils.isEmpty(serviceName)) {

src/main/java/com/gitblit/manager/FilestoreManager.java

@@ -78,8 +78,6 @@ public class FilestoreManager implements IFilestoreManager {
 
 	private final IRuntimeManager runtimeManager;
 	
-	private final IRepositoryManager repositoryManager;
-
 	private final IStoredSettings settings;
 
 	public static final int UNDEFINED_SIZE = -1;
@@ -94,11 +92,8 @@ public class FilestoreManager implements IFilestoreManager {
 
 
 	@Inject
-	FilestoreManager(
-			IRuntimeManager runtimeManager,
-			IRepositoryManager repositoryManager) {
+	public FilestoreManager(IRuntimeManager runtimeManager) {
 		this.runtimeManager = runtimeManager;
-		this.repositoryManager = repositoryManager;
 		this.settings = runtimeManager.getSettings();
 	}
 
@@ -328,9 +323,8 @@ public class FilestoreManager implements IFilestoreManager {
 	}
 
 	@Override
-	public List<FilestoreModel> getAllObjects(UserModel user) {
+	public List<FilestoreModel> getAllObjects(List<RepositoryModel> viewableRepositories) {
 		
-		final List<RepositoryModel> viewableRepositories = repositoryManager.getRepositoryModels(user);
 		List<String> viewableRepositoryNames = new ArrayList<String>(viewableRepositories.size());
 		
 		for (RepositoryModel repository : viewableRepositories) {

src/main/java/com/gitblit/manager/GitblitManager.java

@@ -1274,8 +1274,8 @@ public class GitblitManager implements IGitblit {
 	}
 	
 	@Override
-	public List<FilestoreModel> getAllObjects(UserModel user) {
-		return filestoreManager.getAllObjects(user);
+	public List<FilestoreModel> getAllObjects(List<RepositoryModel> viewableRepositories) {
+		return filestoreManager.getAllObjects(viewableRepositories);
 	}
 	
 	@Override

src/main/java/com/gitblit/manager/IFilestoreManager.java

@@ -37,7 +37,7 @@ public interface IFilestoreManager extends IManager {
 	
 	FilestoreModel.Status downloadBlob(String oid, UserModel user, RepositoryModel repo, OutputStream streamOut );
 	
-	List<FilestoreModel> getAllObjects(UserModel user);
+	List<FilestoreModel> getAllObjects(List<RepositoryModel> viewableRepositories);
 	
 	File getStorageFolder();
 	

src/main/java/com/gitblit/manager/RepositoryManager.java

@@ -123,6 +123,8 @@ public class RepositoryManager implements IRepositoryManager {
 	private final IPluginManager pluginManager;
 
 	private final IUserManager userManager;
+	
+	private final IFilestoreManager filestoreManager;
 
 	private File repositoriesFolder;
 
@@ -136,12 +138,14 @@ public class RepositoryManager implements IRepositoryManager {
 	public RepositoryManager(
 			IRuntimeManager runtimeManager,
 			IPluginManager pluginManager,
-			IUserManager userManager) {
+			IUserManager userManager,
+			IFilestoreManager filestoreManager) {
 
 		this.settings = runtimeManager.getSettings();
 		this.runtimeManager = runtimeManager;
 		this.pluginManager = pluginManager;
 		this.userManager = userManager;
+		this.filestoreManager = filestoreManager;
 	}
 
 	@Override
@@ -1866,7 +1870,7 @@ public class RepositoryManager implements IRepositoryManager {
 	}
 
 	protected void configureLuceneIndexing() {
-		luceneExecutor = new LuceneService(settings, this);
+		luceneExecutor = new LuceneService(settings, this, filestoreManager);
 		String frequency = settings.getString(Keys.web.luceneFrequency, "2 mins");
 		int mins = TimeUtils.convertFrequencyToMinutes(frequency, 2);
 		scheduledExecutor.scheduleAtFixedRate(luceneExecutor, 1, mins,  TimeUnit.MINUTES);

src/main/java/com/gitblit/service/LuceneService.java

@@ -19,6 +19,7 @@ import static org.eclipse.jgit.treewalk.filter.TreeFilter.ANY_DIFF;
 
 import java.io.ByteArrayOutputStream;
 import java.io.File;
+import java.io.FileInputStream;
 import java.io.IOException;
 import java.io.InputStream;
 import java.text.MessageFormat;
@@ -66,6 +67,11 @@ import org.apache.lucene.search.highlight.SimpleSpanFragmenter;
 import org.apache.lucene.store.Directory;
 import org.apache.lucene.store.FSDirectory;
 import org.apache.lucene.util.Version;
+import org.apache.tika.metadata.Metadata;
+import org.apache.tika.parser.AutoDetectParser;
+import org.apache.tika.parser.ParseContext;
+import org.apache.tika.parser.pdf.PDFParser;
+import org.apache.tika.sax.BodyContentHandler;
 import org.eclipse.jgit.diff.DiffEntry.ChangeType;
 import org.eclipse.jgit.lib.Constants;
 import org.eclipse.jgit.lib.FileMode;
@@ -85,8 +91,11 @@ import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
 import com.gitblit.Constants.SearchObjectType;
+import com.gitblit.GitBlit;
 import com.gitblit.IStoredSettings;
 import com.gitblit.Keys;
+import com.gitblit.manager.FilestoreManager;
+import com.gitblit.manager.IFilestoreManager;
 import com.gitblit.manager.IRepositoryManager;
 import com.gitblit.models.PathModel.PathChangeModel;
 import com.gitblit.models.RefModel;
@@ -131,6 +140,8 @@ public class LuceneService implements Runnable {
 
 	private final IStoredSettings storedSettings;
 	private final IRepositoryManager repositoryManager;
+	private final IFilestoreManager filestoreManager;
+	
 	private final File repositoriesFolder;
 
 	private final Map<String, IndexSearcher> searchers = new ConcurrentHashMap<String, IndexSearcher>();
@@ -141,10 +152,12 @@ public class LuceneService implements Runnable {
 
 	public LuceneService(
 			IStoredSettings settings,
-			IRepositoryManager repositoryManager) {
+			IRepositoryManager repositoryManager, 
+			IFilestoreManager filestoreManager) {
 
 		this.storedSettings = settings;
 		this.repositoryManager = repositoryManager;
+		this.filestoreManager = filestoreManager;
 		this.repositoriesFolder = repositoryManager.getRepositoriesFolder();
 		String exts = luceneIgnoreExtensions;
 		if (settings != null) {
@@ -540,7 +553,8 @@ public class LuceneService implements Runnable {
 						if (!paths.containsKey(path)) {
 							continue;
 						}
-
+//TODO: Figure out filestore oid the path - bit more involved than updating the index
+						
 						// remove path from set
 						ObjectId blobId = paths.remove(path);
 						result.blobCount++;
@@ -677,9 +691,24 @@ public class LuceneService implements Runnable {
 					}
 
 					if (StringUtils.isEmpty(ext) || !excludedExtensions.contains(ext)) {
+						String str = "";
 						// read the blob content
-						String str = JGitUtils.getStringContent(repository, commit.getTree(),
+						if (path.isFilestoreItem()) {
+							//Get file from filestore
+							BodyContentHandler handler = new BodyContentHandler();
+	                        Metadata metadata = new Metadata();
+	                        PDFParser parser = new PDFParser();
+	                        
+	                        ParseContext parseContext = new ParseContext();
+	                        File lfsFile = filestoreManager.getStoragePath(path.getFilestoreOid());
+	                        FileInputStream inputstream = new FileInputStream(lfsFile);
+	                        parser.parse(inputstream, handler, metadata, parseContext);
+							str = handler.toString();
+						} else {
+							str = JGitUtils.getStringContent(repository, commit.getTree(),
 								path.path, encodings);
+						}
+						
 						if (str != null) {
 							doc.add(new Field(FIELD_CONTENT, str, TextField.TYPE_STORED));
 							writer.addDocument(doc);

src/main/java/com/gitblit/utils/SyndicationUtils.java

@@ -28,19 +28,19 @@ import com.gitblit.Constants;
 import com.gitblit.Constants.FeedObjectType;
 import com.gitblit.GitBlitException;
 import com.gitblit.models.FeedEntryModel;
-import com.sun.syndication.feed.synd.SyndCategory;
-import com.sun.syndication.feed.synd.SyndCategoryImpl;
-import com.sun.syndication.feed.synd.SyndContent;
-import com.sun.syndication.feed.synd.SyndContentImpl;
-import com.sun.syndication.feed.synd.SyndEntry;
-import com.sun.syndication.feed.synd.SyndEntryImpl;
-import com.sun.syndication.feed.synd.SyndFeed;
-import com.sun.syndication.feed.synd.SyndFeedImpl;
-import com.sun.syndication.feed.synd.SyndImageImpl;
-import com.sun.syndication.io.FeedException;
-import com.sun.syndication.io.SyndFeedInput;
-import com.sun.syndication.io.SyndFeedOutput;
-import com.sun.syndication.io.XmlReader;
+import com.rometools.rome.feed.synd.SyndCategory;
+import com.rometools.rome.feed.synd.SyndCategoryImpl;
+import com.rometools.rome.feed.synd.SyndContent;
+import com.rometools.rome.feed.synd.SyndContentImpl;
+import com.rometools.rome.feed.synd.SyndEntry;
+import com.rometools.rome.feed.synd.SyndEntryImpl;
+import com.rometools.rome.feed.synd.SyndFeed;
+import com.rometools.rome.feed.synd.SyndFeedImpl;
+import com.rometools.rome.feed.synd.SyndImageImpl;
+import com.rometools.rome.io.FeedException;
+import com.rometools.rome.io.SyndFeedInput;
+import com.rometools.rome.io.SyndFeedOutput;
+import com.rometools.rome.io.XmlReader;
 
 /**
  * Utility class for RSS feeds.

src/main/java/com/gitblit/wicket/pages/FilestorePage.java

@@ -67,7 +67,7 @@ public class FilestorePage extends RootPage {
 		final UserModel user = (GitBlitWebSession.get().getUser() == null) ? UserModel.ANONYMOUS : GitBlitWebSession.get().getUser();
 		final long nBytesUsed = app().filestore().getFilestoreUsedByteCount();
 		final long nBytesAvailable = app().filestore().getFilestoreAvailableByteCount();
-		List<FilestoreModel> files = app().filestore().getAllObjects(user);
+		List<FilestoreModel> files = app().filestore().getAllObjects(app().repositories().getRepositoryModels(user));
 
 		if (files == null) {
 			files = new ArrayList<FilestoreModel>();

src/test/java/com/gitblit/tests/BranchTicketServiceTest.java

@@ -16,6 +16,8 @@
 package com.gitblit.tests;
 
 import com.gitblit.IStoredSettings;
+import com.gitblit.manager.FilestoreManager;
+import com.gitblit.manager.IFilestoreManager;
 import com.gitblit.manager.INotificationManager;
 import com.gitblit.manager.IPluginManager;
 import com.gitblit.manager.IRepositoryManager;
@@ -57,7 +59,8 @@ public class BranchTicketServiceTest extends TicketServiceTest {
 		IPluginManager pluginManager = new PluginManager(runtimeManager).start();
 		INotificationManager notificationManager = new NotificationManager(settings).start();
 		IUserManager userManager = new UserManager(runtimeManager, pluginManager).start();
-		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, pluginManager, userManager).start();
+		IRepositoryManager repositoryManager = new RepositoryManager(
+				runtimeManager, pluginManager, userManager, null).start();
 
 		BranchTicketService service = new BranchTicketService(
 				runtimeManager,

src/test/java/com/gitblit/tests/FileTicketServiceTest.java

@@ -56,7 +56,8 @@ public class FileTicketServiceTest extends TicketServiceTest {
 		IPluginManager pluginManager = new PluginManager(runtimeManager).start();
 		INotificationManager notificationManager = new NotificationManager(settings).start();
 		IUserManager userManager = new UserManager(runtimeManager, pluginManager).start();
-		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, pluginManager, userManager).start();
+		IRepositoryManager repositoryManager = new RepositoryManager(
+				runtimeManager, pluginManager, userManager, null).start();
 
 		FileTicketService service = new FileTicketService(
 				runtimeManager,

src/test/java/com/gitblit/tests/LuceneExecutorTest.java

@@ -24,6 +24,7 @@ import org.junit.Before;
 import org.junit.Test;
 
 import com.gitblit.Keys;
+import com.gitblit.manager.FilestoreManager;
 import com.gitblit.manager.RepositoryManager;
 import com.gitblit.manager.RuntimeManager;
 import com.gitblit.manager.UserManager;
@@ -53,8 +54,9 @@ public class LuceneExecutorTest extends GitblitUnitTest {
 		XssFilter xssFilter = new AllowXssFilter();
 		RuntimeManager runtime = new RuntimeManager(settings, xssFilter, GitBlitSuite.BASEFOLDER).start();
 		UserManager users = new UserManager(runtime, null).start();
-		RepositoryManager repos = new RepositoryManager(runtime, null, users);
-		return new LuceneService(settings, repos);
+		RepositoryManager repos = new RepositoryManager(runtime, null, users, null);
+		//TODO: May need filestore
+		return new LuceneService(settings, repos, null);
 	}
 
 	private RepositoryModel newRepositoryModel(Repository repository) {

src/test/java/com/gitblit/tests/RedisTicketServiceTest.java

@@ -64,7 +64,7 @@ public class RedisTicketServiceTest extends TicketServiceTest {
 		IPluginManager pluginManager = new PluginManager(runtimeManager).start();
 		INotificationManager notificationManager = new NotificationManager(settings).start();
 		IUserManager userManager = new UserManager(runtimeManager, pluginManager).start();
-		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, pluginManager, userManager).start();
+		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, pluginManager, userManager, null).start();
 
 		RedisTicketService service = new RedisTicketService(
 				runtimeManager,

src/test/java/com/gitblit/tests/UITicketTest.java

@@ -81,7 +81,7 @@ public class UITicketTest extends GitblitUnitTest {
 		IPluginManager pluginManager = new PluginManager(runtimeManager).start();
 		INotificationManager notificationManager = new NotificationManager(settings).start();
 		IUserManager userManager = new UserManager(runtimeManager, pluginManager).start();
-		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, pluginManager, userManager).start();
+		IRepositoryManager repositoryManager = new RepositoryManager(runtimeManager, pluginManager, userManager, null).start();
 
 		BranchTicketService service = new BranchTicketService(
 				runtimeManager,