Follow
https://github.com/go-gitea/gitea/pull/28796#issuecomment-1891727591

* Close #28444 
* Actually, it doesn't need to use that trick because it looks like it
is not necessary, no user really needs it
* Remove the hidden (legacy) "doctor" subcommand and update documents
* Fix "actions" usage


![image](https://github.com/go-gitea/gitea/assets/2114189/3c2b34a7-4f92-4a6c-96fd-9505e413d4ec)

Replace #10912

And there are many new tests to cover the CLI behavior

There were some concerns about the "option order in hook scripts"
(https://github.com/go-gitea/gitea/pull/10912#issuecomment-1137543314),
it's not a problem now. Because the hook script uses `/gitea hook
--config=/app.ini pre-receive` format. The "config" is a global option,
it can appear anywhere.

----

## ⚠️ BREAKING ⚠️

This PR does it best to avoid breaking anything. The major changes are:

* `gitea` itself won't accept web's options: `--install-port` / `--pid`
/ `--port` / `--quiet` / `--verbose` .... They are `web` sub-command's
options.
    * Use `./gitea web --pid ....` instead
* `./gitea` can still run the `web` sub-command as shorthand, with
default options
* The sub-command's options must follow the sub-command
* Before: `./gitea --sub-opt subcmd` might equal to `./gitea subcmd
--sub-opt` (well, might not ...)
    * After: only `./gitea subcmd --sub-opt` could be used
    * The global options like `--config` are not affected

# The problem

There were many "path tricks":

* By default, Gitea uses its program directory as its work path
* Gitea tries to use the "work path" to guess its "custom path" and
"custom conf (app.ini)"
* Users might want to use other directories as work path
* The non-default work path should be passed to Gitea by GITEA_WORK_DIR
or "--work-path"
* But some Gitea processes are started without these values
    * The "serv" process started by OpenSSH server
    * The CLI sub-commands started by site admin
* The paths are guessed by SetCustomPathAndConf again and again
* The default values of "work path / custom path / custom conf" can be
changed when compiling

# The solution

* Use `InitWorkPathAndCommonConfig` to handle these path tricks, and use
test code to cover its behaviors.
* When Gitea's web server runs, write the WORK_PATH to "app.ini", this
value must be the most correct one, because if this value is not right,
users would find that the web UI doesn't work and then they should be
able to fix it.
* Then all other sub-commands can use the WORK_PATH in app.ini to
initialize their paths.
* By the way, when Gitea starts for git protocol, it shouldn't output
any log, otherwise the git protocol gets broken and client blocks
forever.

The "work path" priority is: WORK_PATH in app.ini > cmd arg --work-path
> env var GITEA_WORK_DIR > builtin default

The "app.ini" searching order is: cmd arg --config > cmd arg "work path
/ custom path" > env var "work path / custom path" > builtin default


## ⚠️ BREAKING

If your instance's "work path / custom path / custom conf" doesn't meet
the requirements (eg: work path must be absolute), Gitea will report a
fatal error and exit. You need to set these values according to the
error log.



----

Close #24818
Close #24222
Close #21606
Close #21498
Close #25107
Close #24981
Maybe close #24503

Replace #23301
Replace #22754

And maybe more

This PR will merge 3 Init functions on setting packages as 1 and
introduce an options struct.

This is a CLI command to generate new tokens for the runners to register
with

Fix https://github.com/go-gitea/gitea/issues/23643

---------

Co-authored-by: delvh <dev.lh@web.de>