The first step to deleting a repository from the DHT storage is to
remove the name binding in the RepositoryIndexTable, making the
repository unavailable for lookup.

Change-Id: I469bf92f4bf2f555a15949569b21937c14cb142b
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>

There is a data corruption issue with the 'running' list if a
background thread schedules something onto the buffer while the
application thread is also using it.

Change-Id: I5ba78b98b6632965d677a9c8f209f0cf8320cc3d
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>

The standard Google distribution of Protocol Buffers in Java is better
maintained than TinyProtobuf, and should be faster for most uses.  It
does use slightly more memory due to many of our key types being
stored as strings in protobuf messages, but this is probably worth the
small hit to memory in exchange for better maintained code that is
easier to reuse in other applications.

Exposing all of our data members to the underlying implementation
makes it easier to develop reporting and data mining tools, or to
expand out a nested structure like RefData into a flat format in a SQL
database table.

Since the C++ `protoc` tool is necessary to convert the protobuf
script into Java code, the generated files are committed as part of
the source repository to make it easier for developers who do not have
this tool installed to still build the overall JGit package and make
use of it.  Reviewers will need to be careful to ensure that any edits
made to a *.proto file come in a commit that also updates the
generated code to match.

CQ: 5135
Change-Id: I53e11e82c186b9cf0d7b368e0276519e6a0b2893
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>
Signed-off-by: Chris Aniszczyk <caniszczyk@gmail.com>

jgit.storage.dht is a storage provider implementation for JGit that
permits storing the Git repository in a distributed hashtable, NoSQL
system, or other database.  The actual underlying storage system is
undefined, and can be plugged in by implementing 7 small interfaces:

  *  Database
  *  RepositoryIndexTable
  *  RepositoryTable
  *  RefTable
  *  ChunkTable
  *  ObjectIndexTable
  *  WriteBuffer

The storage provider interface tries to assume very little about the
underlying storage system, and requires only three key features:

  *  key -> value lookup (a hashtable is suitable)
  *  atomic updates on single rows
  *  asynchronous operations (Java's ExecutorService is easy to use)

Most NoSQL database products offer all 3 of these features in their
clients, and so does any decent network based cache system like the
open source memcache product.  Relying only on key equality for data
retrevial makes it simple for the storage engine to distribute across
multiple machines.  Traditional SQL systems could also be used with a
JDBC based spi implementation.

Before submitting this change I have implemented six storage systems
for the spi layer:

  * Apache HBase[1]
  * Apache Cassandra[2]
  * Google Bigtable[3]
  * an in-memory implementation for unit testing
  * a JDBC implementation for SQL
  * a generic cache provider that can ride on top of memcache

All six systems came in with an spi layer around 1000 lines of code to
implement the above 7 interfaces.  This is a huge reduction in size
compared to prior attempts to implement a new JGit storage layer.  As
this package shows, a complete JGit storage implementation is more
than 17,000 lines of fairly complex code.

A simple cache is provided in storage.dht.spi.cache.  Implementers can
use CacheDatabase to wrap any other type of Database and perform fast
reads against a network based cache service, such as the open source
memcached[4].  An implementation of CacheService must be provided to
glue this spi onto the network cache.

[1] https://github.com/spearce/jgit_hbase
[2] https://github.com/spearce/jgit_cassandra
[3] http://labs.google.com/papers/bigtable.html
[4] http://memcached.org/

Change-Id: I0aa4072781f5ccc019ca421c036adff2c40c4295
Signed-off-by: Shawn O. Pearce <spearce@spearce.org>