WindowCache: add option to use strong refs to reference ByteWindows
Java GC evicts all SoftReferences when the used heap size comes close to
the maximum heap size. This means peaks in heap memory consumption can
flush the complete WindowCache which was observed to have negative
impact on performance of upload-pack in Gerrit.
Hence add a boolean option core.packedGitUseStrongRefs to allow using
strong references to reference packfile pages cached in the WindowCache.
If this option is set to true Java gc can no longer flush the
WindowCache to free memory if the used heap comes close to the maximum
heap size. On the other hand this provides more predictable performance.
Bug: 553573
Change-Id: I9de406293087ab0fa61130c8e0829775762ece8d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Add the following statistics
- cache hit count and hit ratio
- cache miss count and miss ratio
- count of successful and failed loads
- rate of failed loads
- load, eviction and request count
- average and total load time
Use LongAdder instead of AtomicLong to implement counters in order to
improve scalability.
Optionally expose these metrics via JMX, they are registered with the
platform MBean server if the config option jmx.WindowCacheStats = true
in the user or system level git config.
Bug: 553573
Change-Id: Ia2d5246ef69b9c2bd594a23934424bc5800774aa
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
- filter errors for new APIs added in service release
- remove unused filters
Change-Id: Ifbf532b8a3c46d4ed78a38f6c75073a072b7f669
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Return a new instance from openSystemConfig and openUserConfig
Move the handling of cached user and system config to getSystemConfig
and getUserConfig methods and revert the implementation of
openSystemConfig and openUserConfig to the old stateless
implementation.
This ensures the open methods respect the passed-in parent config, which
may be different on each invocation. Additionally, returning a new
instance matches the behavior of the previous implementation of the
default system reader, which downstream callers may be depending on.
Move the implementation of the new caching methods getSystemConfig and
getUserConfig up to SystemReader. This avoids that we break the ABI for
subclasses of SystemReader.
Also see [1] which fixed a similar problem with Gerrit's custom
SystemReader.
[1] https://gerrit-review.googlesource.com/c/gerrit/+/225458
Change-Id: If54a2491932d8fc914d4649cb73c9e837c5b8ad0
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Cache user global and system-wide git configurations
So far the git configuration and the system wide git configuration were
always reloaded when jgit accessed these global configuration files to
access global configuration options which are not in the context of a
single git repository. Cache these configurations in SystemReader and
only reload them if their file metadata observed using FileSnapshot
indicates a modification.
Change-Id: I092fe11a5d95f1c5799273cacfc7a415d0b7786c
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Remove FileBasedConfig.load(boolean) introduced in d45219ba
We can't add this method to the super class StoredConfig since that
abstracts from filesystem storage. MockSystemReader.MockConfig is a
StoredConfig and is also used by tests for dfs based storage. Hence
remove this leaky abstraction.
This implies we always use the fallback FileStoreAttributes which means
a config file modification is considered racy within the first 2
seconds. This should not be an issue since typically configs change
rarely and re-reading a config within the racy period is relatively
cheap since configs are small.
Change-Id: Ia2615addc24a7cadf3c566ee842c6f4f07e159a5
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Cache FileStoreAttributeCache entries since looking up FileStore for a
file may be expensive on some platforms.
Implement a simple LRU cache based on ConcurrentHashMap using a simple
long counter to order access to cache entries.
Change-Id: I4881fa938ad2f17712c05da857838073a2fc4ddb
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Signed-off-by: Marc Strapetz <marc.strapetz@syntevo.com>
Also-By: Marc Strapetz <marc.strapetz@syntevo.com>
Persist minimal racy threshold and allow manual configuration
To enable persisting the minimal racy threshold per FileStore add a
new config option to the user global git configuration:
- Config section is "filesystem"
- Config subsection is concatenation of
- Java vendor (system property "java.vendor")
- Java version (system property "java.version")
- FileStore's name, on Windows we use the attribute volume:vsn instead
since the name is not necessarily unique.
- separated by '|'
e.g.
"AdoptOpenJDK|1.8.0_212-b03|/dev/disk1s1"
The same prefix is used as for filesystem timestamp resolution, so
both values are stored in the same config section
- The config key for minmal racy threshold is "minRacyThreshold" as a
time value, supported time units are those supported by
DefaultTypedConfigGetter#getTimeUnit
- measure for 3 seconds to limit runtime which depends on hardware, OS
and Java version being used
If the minimal racy threshold is configured for a given FileStore the
configured value is used instead of measuring it.
When the minimal racy threshold was measured it is persisted in the user
global git configuration.
Rename FileStoreAttributeCache to FileStoreAttributes since this class
is now declared public in order to enable exposing all attributes in one
object.
Example:
[filesystem "AdoptOpenJDK|11.0.3|/dev/disk1s1"]
timestampResolution = 7000 nanoseconds
minRacyThreshold = 3440 microseconds
Change-Id: I22195e488453aae8d011b0a8e3276fe3d99deaea
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Also-By: Marc Strapetz <marc.strapetz@syntevo.com>
Measure minimum racy interval to auto-configure FileSnapshot
By running FileSnapshotTest#detectFileModified we found that the sum of
measured filesystem timestamp resolution and measured clock resolution
may yield a too small interval after a file has been modified which we
need to consider racily clean. In our tests we didn't find this behavior
on all systems we tested on, e.g. on MacOS using APFS and Java 8 and 11
this effect was not observed.
On Linux (SLES 15, kernel 4.12.14-150.22-default) we collected the
following test results using Java 8 and 11:
In 23-98% of 10000 test runs (depending on filesystem type and Java
version) the test failed, which means the effective interval which needs
to be considered racily clean after a file was modified is larger than
the measured file timestamp resolution.
"delta" is the observed interval after a file has been modified but
FileSnapshot did not yet detect the modification:
"resolution" is the measured sum of file timestamp resolution and clock
resolution seen in Java.
Java version filesystem failures resolution min delta max delta
1.8.0_212-b04 btrfs 98.6% 1 ms 3.6 ms 6.6 ms
1.8.0_212-b04 ext4 82.6% 3 ms 1.1 ms 4.1 ms
1.8.0_212-b04 xfs 23.8% 4 ms 3.7 ms 3.9 ms
1.8.0_212-b04 zfs 23.1% 3 ms 4.8 ms 5.0 ms
11.0.3+7 btrfs 98.1% 3 us 0.7 ms 4.7 ms
11.0.3+7 ext4 98.1% 6 us 0.7 ms 4.7 ms
11.0.3+7 xfs 98.5% 7 us 0.1 ms 8.0 ms
11.0.3+7 zfs 98.4% 7 us 0.7 ms 5.2 ms
Mac OS
1.8.0_212 APFS 0% 1 s
11.0.3+7 APFS 0% 6 us
The observed delta is not distributed according to a normal gaussian
distribution but rather random in the observed range between "min delta"
and "max delta".
Run this test after measuring file timestamp resolution in
FS.FileAttributeCache to auto-configure JGit since it's unclear what
mechanism is causing this effect.
In FileSnapshot#isRacyClean use the maximum of the measured timestamp
resolution and the measured "delta" as explained above to decide if a
given FileSnapshot is to be considered racily clean. Add a 30% safety
margin to ensure we are on the safe side.
Change-Id: I1c8bb59f6486f174b7bbdc63072777ddbe06694d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Repeat the test 10000 times to get statistics if measured
fsTimestampResolution is working in practice to detect racy git
situations.
Add a class to compute statistics for this test. Log delta between
lastModified and time when FileSnapshot failed to detect modification.
This happens if the racy git limit determined by measuring filesystem
timestamp resolution and clock resolution is too small. If it would be
correct FileSnapshot would always detect modification or mark it
modified if time since modification is smaller than the racy git limit.
Change-Id: Iabe7af1a7211ca58480f8902d4fa4e366932fc77
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Use Instant instead of milliseconds for filesystem timestamp handling
This enables higher file timestamp resolution on filesystems like ext4,
Mac APFS (1ns) or NTFS (100ns) providing high timestamp resolution on
filesystem level.
Note:
- on some OSes Java 8,9 truncate milliseconds, see
https://bugs.openjdk.java.net/browse/JDK-8177809, fixed in Java 10
- UnixFileAttributes truncates timestamp resolution to microseconds when
converting the internal representation to FileTime exposed in the API,
see https://bugs.openjdk.java.net/browse/JDK-8181493
- WindowsFileAttributes also provides only microsecond resolution
Change-Id: I25ffff31a3c6f725fc345d4ddc2f26da3b88f6f2
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Use FileChannel.open to touch file and set mtime to now
Use options
- StandardOpenOption.CREATE to create touched file if not existing
- StandardOpenOption.SYNC to enforce synch of data and meta data changes
- StandardOpenOption.WRITE
Also set mtime explicitly in FileUtils#touch to the current system time.
This should fix that the previous implementation didn't work on
- locally cached Windows network share (CSC-CACHE filesystem) mapped as
a drive
- nfsv4 mounts on Linux
and that it didn't create unborn file like Linux command "touch".
Apache common's and Guava's touch() use the same approach.
Immediately after creating the probe file used to measure timestamp
resolution touch it. This ensures we always use the local system clock
when measuring filesystem timestamp resolution. This should prevent that
clock skew could influence the measured timestamp resolution in case of
a mounted network filesystem.
Bug: 548598
Change-Id: Iaeaf5967963f582395a195aa637b8188bfadac60
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Persist filesystem timestamp resolution and allow manual configuration
To enable persisting filesystem timestamp resolution per FileStore add a
new config section to the user global git configuration:
- Config section is "filesystem"
- Config subsection is concatenation of
- Java vendor (system property "java.vm.vendor")
- runtime version (system property "java.vm.version")
- FileStore's name
- separated by '|'
e.g.
"AdoptOpenJDK|1.8.0_212-b03|/dev/disk1s1"
The prefix is needed since some Java versions do not expose the full
timestamp resolution of the underlying filesystem. This may also
depend on the underlying operating system hence concrete key values
may not be portable.
- Config key for timestamp resolution is "timestampResolution" as a time
value, supported time units are those supported by
DefaultTypedConfigGetter#getTimeUnit
If timestamp resolution is already configured for a given FileStore
the configured value is used instead of measuring the resolution.
When timestamp resolution was measured it is persisted in the user
global git configuration.
Example:
[filesystem "AdoptOpenJDK|1.8.0_212-b03|/dev/disk1s1"]
timestampResolution = 1 seconds
If locking the git config file fails retry saving the resolution up to 5
times in order to workaround races with another thread.
In order to avoid stack overflow use the fallback filesystem timestamp
resolution when loading FileBasedConfig which creates itself a
FileSnapshot to help checking if the config changed.
Note:
- on some OSes Java 8,9 truncate to milliseconds or seconds, see
https://bugs.openjdk.java.net/browse/JDK-8177809, fixed in Java 10
- UnixFileAttributes up to Java 12 truncates timestamp resolution to
microseconds when converting the internal representation to FileTime
exposed in the API, see https://bugs.openjdk.java.net/browse/JDK-8181493
- WindowsFileAttributes also provides only microsecond resolution up to
Java 12
Hence do not attempt to manually configure a higher timestamp resolution
than supported by the Java version being used at runtime.
Bug: 546891
Bug: 548188
Change-Id: Iff91b8f9e6e5e2295e1463f87c8e95edf4abbcf8
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
In order to avoid blocking on the main thread during measurement
interactive applications like EGit may want to measure the filesystem
timestamp resolution asynchronously.
In order to enable measurement in the background call
FileStoreAttributeCache.setAsyncfileStoreAttrCache(true)
before the first access to cached FileStore attributes.
Bug: 548188
Change-Id: I8c9a2dbfc3f1d33441edea18b90e36b1dc0156c7
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Wait opening new packfile until it can't be racy anymore
If
- pack.waitPreventRacyPack = true (default is false)
- packfile size > pack.minSizePreventRacyPack (default is 100 MB)
wait after a new packfile was written and before it is opened until it
cannot be racy anymore.
If a new packfile is accessed while it's still racy at least the pack's
index will be reread by ObjectDirectory.scanPacksImpl(). Hence it may
save resources to wait one tick of the file system timer to avoid this
reloading. On filesystems with a coarse timestamp resolution it may be
beneficial to skip this wait for small packfiles.
Bug: 546891
Change-Id: I0e8bf3d7677a025edd2e397dd2c9134ba59b1a18
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Measure file timestamp resolution used in FileSnapshot
FileSnapshot.notRacyClean() assumed a worst case filesystem timestamp
resolution of 2.5 sec (FAT has a resolution of 2 sec). Instead measure
timestamp resolution to avoid unnecessary IO caused by false positives
in detecting the racy git problem caused by finite filesystem timestamp
resolution [1].
Cache the measured resolution per FileStore since timestamp resolution
depends on the respective filesystem type. If timestamp resolution
cannot be measured or fails due to an exception fallback to the worst
case FAT timestamp resolution and avoid caching this value.
Add a 10% safety margin in FileSnapshot.notRacyClean(), though running
FsTest.testFsTimestampResolution() 1000 times which is not using a
safety margin didn't fail on Mac using APFS and Java 8, 11, 12.
Measured Java file timestamp resolution: [2]
[1] https://github.com/git/git/blob/master/Documentation/technical/racy-git.txt
[2] https://docs.google.com/spreadsheets/d/1imy0y6WmRqBf0kjCxzxj2X7M50eIVfa7oaUIzEOHmjo
Bug: 546891
Change-Id: I493f3b57b6b306285ffa7d392339d253e5966ab8
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Keep track of the original cause for a packfile invalidation.
It is needed for the sysadmin to understand if there is a real
underlying filesystem problem and repository corruption or if it is
simply a consequence of a concurrency of Git operations (e.g. repack
or GC).
Change-Id: I06ddda9ec847844ec31616ab6d17f153a5a34e33
Signed-off-by: Luca Milanesio <luca.milanesio@gmail.com>
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Due to finite filesystem timestamp resolution the last modified
timestamp of files cannot detect file changes which happened in the
immediate past (less than one filesystem timer tick ago).
Read and consider file size also, so that differing file size can help
to more accurately detect file changes without reading the file content.
Use bulk read to avoid multiple stat calls to retrieve file attributes.
Change-Id: I974288fff78ac78c52245d9218b5639603f67a46
Signed-off-by: Luca Milanesio <luca.milanesio@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Add a method to get all values of HTTP header defined as list
According to RFC 2616 [1] header field names are case insensitive.
Header fields defined as a comma separated list can have multiple header
fields with the same field name. Add a method to HttpConnection which
retrieves all values with a given header field name with the field name
compared case insensitive.
[1] https://tools.ietf.org/html/rfc2616#section-4.2"
Change-Id: I7f601b21cda99e84f43f866c7c7cb4cb0e3cf5c3
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Introduce an FtpChannel abstraction, which can be obtained from a
RemoteSession. In JSchSession, wrap a JSch ChannelSftp as such an
FtpChannel. The JSch-specific SftpException is also mapped to a
generic FtpException. Rewrite TransportSftp to use only the new
abstraction layer.
This makes it possible to provide alternate ssh/sftp implementations.
Bug: 520927
Change-Id: I379026f7d4122f34931df909a28e73c02cd8a1da
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
The removed method and the new interface method only affect implementors
which is ok in a minor release following OSGi semantic versioning.
Change-Id: Ia5e55bd803965c7590c9278eecc6bdd36241383f
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Silence API errors for new methods added to DepthWalk
237abe6a added method getDeepenNots() with a default implementation and
method getDeepenNotFlag() to the interface DepthWalk. This affects
implementers which is ok in minor release following OSGi semantic
versioning.
Change-Id: I1c872da261fc6825e1e310127761b8b8a6d397d4
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Disable Eclipse warning about unrecognized @SuppressWarnings value
The code base has several @SuppressWarnings annotations to suppress
warnings raised by Error Prone, but those are not recognized by
Eclipse and there is currently no way to tell it about them [1].
Suppress them for now.
[1] https://bugs.eclipse.org/bugs/show_bug.cgi?id=392045
Change-Id: I3de7cfa8ad4370ca5be71e1303879c73ab6829c1
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
This reverts commit 37c7fbd661.
These filters weren't unused. Without them Eclipse raises 4 API errors.
Change-Id: I5ce443d40b5f517be4a315479e81246d40af1983
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
ObjectChecker: Report .gitmodules files found in the pack
In order to validate .gitmodules files, we first need to find them
in the incoming pack.
Do it in the ObjectChecker stage. Check in the tree objects if they
point to a .gitmodules file and report the tree id and the .gitmodules
blob id.
This can be used later to check if the file is in the root of the
project and if the contents are good.
While we're here, make isMacHFSGit more accurate by detecting variants
of filenames that vary in case.
[jn: tweaked NTFS and HFS+ checking; added more tests]
Change-Id: I70802e7d2c1374116149de4f89836b9498f39582
Signed-off-by: Ivan Frade <ifrade@google.com>
Signed-off-by: Jonathan Nieder <jrn@google.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
SubmoduleAddCommand: Reject submodule URIs that look like cli options
In C git versions before 2.19.1, the submodule is fetched by running
"git clone <uri> <path>". A URI starting with "-" would be interpreted
as an option, causing security problems. See CVE-2018-17456.
Refuse to add submodules with URIs, names or paths starting with "-",
that could be confused with command line arguments.
[jn: backported to JGit 4.7.y, bringing portions of Masaya Suzuki's
dotdot check code in v5.1.0.201808281540-m3~57 (Add API to specify
the submodule name, 2018-07-12) along for the ride]
Change-Id: I2607c3acc480b75ab2b13386fe2cac435839f017
Signed-off-by: Ivan Frade <ifrade@google.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Silence API warning for method added to interface DepthWalk
Breaking implementers is ok in a minor version update following OSGi
semantic versioning. According to [1] adding a default method is ok if
risk of inheriting a method with the same name from multiple interfaces
is low.
[1] https://wiki.eclipse.org/Evolving_Java-based_APIs_2#Evolving_API_Interfaces
Change-Id: Iad354cb73cfff9a96b9a9852a3c4d9ba0c5df430
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Matthias Sohn
Luca Milanesio
Thomas Wolf
David Pursehouse
Ivan Frade