* [pgm] Fix default meta variable defined in StopOptionHandler
* Fix typo in javadoc of PathTreeFilterHandler

* Introduce getMergedInto(RevCommit commit, Collection<Ref> refs)

* Rename a test method

* Verify that the user home directory is valid

* reftable: don't check deadline on the first try
* reftable: clarify comment
* reftable: clear cache on full compaction
* reftable: remove outdated comment
* reftable: clarify that LogCursor may return a null ReflogEntry

* Update orbit to S20200128200239 for 2020-03 M2

* Implement toString in MockSystemReader and MockConfig
* LocalDiskRefTreeDatabaseTest shall use MockSystemReader
* Ensure LocalDiskRepositoryTestCase#setup fully uses MockSystemReader
* Ensure we use MockSystemReader in tests
* Override FileBasedConfig's save method in MockConfig
* Remove FileBasedConfig.load(boolean) introduced in d45219ba
* Disable debug log for FS in org.eclipse.jgit.test

* Use Arrays.asList instead of copying array in a for loop

* BlockListTest: Add missing calls to fail()
* DirCacheBuilderTest#testBuildRejectsUnsetFileMode: Add missing fail()
* DirCacheCheckoutTest#testCheckoutHierarchy: Add missing call to fail()
* ConfigTest: Fix tests for getting empty config value as int
* FileResolverTest#testNotAGitRepository: Fail when exception is not thrown

* JGit v4.9.5.201809180939-r

* Prepare 5.0.4-SNAPSHOT builds

* UploadPack: shallowExcludeRefs doesn't need to be nullable

* Merge branch 'stable-4.9' into stable-4.10

* Merge branch 'stable-5.0'

* TransportHttp: Refactor to use try-with-resource and suppress resource warning

* JschConfigSessionFactory: Open FileInputStream in try-with-resource
* CommandCatalog: Use StandardCharsets.UTF_8
* JGitTestUtil: Open auto-closeable resources in try-with-resource
* Use StandardCharsets.UTF_8 in tests
* InfoRefsServlet: Open OutputStreamWriter in try-with-resource
* IndexDiffWithSymlinkTest: Open InputStream in try-with-resource
* HugeFileTest: Open RandomAccessFile in try-with-resource

* Fix javadoc in org.eclipse.jgit.lfs
* Fix javadoc in org.eclipse.jgit.junit
* Fix javadoc in org.eclipse.jgit.junit.http

* Add org.apache.commons.codec 1.9.0 to target platform

* Limit receive commands

* LfsProtocolServlet: Always set the Content-Type header on response
* LfsProtocolServlet: Don't set pretty printing on Gson

* Merge branch 'stable-4.4'

* Merge branch 'stable-4.0'

* TestRepository: Allow setting explicit Change-Id
* TestRepository: Ignore existing Change-Id in message
* TestRepository: Support committing to unborn symref
* TestRepository: Expose some getters for CommitBuilder
* TestRepository: Add methods to amend commits or refs
* TestRepository: Add a reset method to move HEAD around
* TestRepository: Optionally insert Change-Id in commit message

* Merge branch 'stable-3.5'

* Drop warnings about unchecked casts in a few stable select places
* Hide warnings about field hiding in the MyersDiff code
* Fix warnings about missing serialVersionUID
* Fix warning about missing serialVersionUID
* Rename local variables/parameters to remove warnings about hiding
* Remove non-existing source directories from Java 7 test build
* Eliminate warnings for non-nls strings that will never be translated

* Remove unused import

* Creates HttpAuthMethod type enum to support auth ordering

* Handle repo copyfile in bare repositories.
* Handle the revision attribute in repo manifest.
* Handle repo submodules for bare repositories.

* Add special case to WorkingTreeIterator for matching unnormalized symlinks

* Require a DiffConfig when creating a FollowFilter

* Revert "Stop PathFilter after walking all matching paths"