* ApplyCommand: fix "no newline at end" detection
* ApplyCommand: handle completely empty context lines in text patches
* ApplyCommand: use byte arrays for text patches, not strings
* ApplyCommand: support binary patches
* ApplyCommand: add a stream to apply a delta patch
* ApplyCommand: add streams to read/write binary patch hunks
* ApplyCommand: add a base-85 codec
* ApplyCommand: convert to git internal format before applying patch
* Refactor CommitCommand to improve readability
* CommitCommand: fix formatting
* CommitCommand: remove unncessary comment
* Ensure post-commit hook is called after index lock was released
* AdvertiseErrorTest: Open Transport in try-with-resource
* AddCommandTest: Open PrintWriter in try-with-resource
* FileBasedConfigTest: Open FileOutputStream in try-with-resource
* WalkRemoteObjectDatabase: Open auto-closeable resources in try-with-resource
* TransportSftp: Open BufferedReader in try-with-resource
* ReflogReaderTest: Open FileOutputStream in try-with-resource
* ReflogReaderTest: Fix indentation
* ReflogWriterTest: Open FileInputStream in try-with-resource
* TransportHttp: Open auto-closeable resources in try-with-resource
* RebaseCommandTest: Open BufferedReader in try-with-resource
* DirCacheCGitCompatabilityTest: Open BufferedReader in try-with-resource
* LockFile: Open FileInputStream in try-with-resource
* CheckoutCommandTest: Open FileInputStream in try-with-resource
* SmudgeFilter: Fix Integer boxing warning
* Add ConfigConstants.CONFIG_SECTION_LFS
* NoteMapTest: Open TreeWalk instances in try-with-resource
* ObjectDirectoryTest: Fix warnings about variable hiding
* PackWriterTest: Open RevWalk in try-with-resource
* PatchIdDiffFormatterTest: Open Git and PatchIdDiffFormatter in try-with-resource
* PathSuffixFilterTest: Open TreeWalk in try-with-resource
* PostOrderTreeWalkTest: Open TreeWalk in try-with-resource
* PullCommandWithRebaseTest: Open RevWalk in try-with-resource
* PushCommandTest: Open Git instances in try-with-resource
* RacyGitTests: Open NameConflictTreeWalk in try-with-resource
* RecursiveMergerTest: Open TreeWalk and BufferedReader in try-with-resource
* ReflogConfigTest: refactor commit method to avoid variable hiding
* Update .mailmap
* RefDirectoryTest: Fix warning about member variable hiding
* ReflogResolveTest: Open Git instances in try-with-resource
* ReflogTest: Open Git instances in try-with-resource
* RepoCommandTest: Open Git instances in try-with-resource
* Allow configuration of receive pack's ObjectChecker through fsck.*
* Correct fetch to use fetch.fsckObjects and transfer.fsckObjects
* Default receive.fsckObjects to transfer.fsckObjects
* Allow ReceivePack callers to configure their own ObjectChecker
* Check for duplicate names after folding case in ObjectChecker
* Change DirCacheCheckout to verify path using ObjectChecker
* Reject mixed case .git on Mac OS in ObjectChecker
* Reject special Windows device names in ObjectChecker
* Allow an ObjectChecker to reject special characters for Windows
* Reject '.git' as a tree name in ObjectChecker
* Extract path segment check function in ObjectChecker
* Permit ObjectChecker to optionally accept leading '0' in trees
* Length of symbolic link is the number of bytes, not characters
* Add delete support to FS
* Dynamically detect if Windows supports symbolic links
* Add symlink support to JGit
* Fix CloneCommand not to fetch into remote tracking branches when bare
* Make sure test repositories are closed
* Ensure the HTTP request is fully consumed
* Change EditList to extend ArrayList
* jgit.sh: Implement pager support
* DHT: Fix thread-safety issue in AbstractWriteBuffer
* DHT: Support removing a repository name