* ApplyCommand: fix "no newline at end" detection
* ApplyCommand: handle completely empty context lines in text patches
* ApplyCommand: use byte arrays for text patches, not strings
* ApplyCommand: support binary patches
* ApplyCommand: add a stream to apply a delta patch
* ApplyCommand: add streams to read/write binary patch hunks
* ApplyCommand: add a base-85 codec
* ApplyCommand: convert to git internal format before applying patch

* PackBitmapIndex: Set distance threshold
* PackBitmapIndex: Not buffer inflated bitmap in BasePackBitmapIndex
* PackBitmapIndex: Remove convertedBitmaps in the Remapper
* PackBitmapIndex: Reduce memory usage in GC
* PackBitmapIndex: Add AddToBitmapWithCacheFilter class
* PackBitmapIndex: Add util methods and builder to BitmapCommit
* PackBitmapIndex: Move BitmapCommit to a top-level class
* Refactor: Make retriveCompressed an method of the Bitmap class

* Allow for using custom s3 host with lfs server

* Fix off-by-one error in RebaseTodoFile when reading a todo file

* PacketLineIn: Add helper methods to check for END and DELIM
* UploadPackTest: Rename variable to avoid hiding class member
* UploadPackTest: Add missing <> operator on instantiation of ArrayList

* RefDatabase: Introduce findRef synonym for getRef
* RefDirectory: Look up several exact refs in one shot

* Merge branch 'stable-5.0'

* Merge branch 'stable-4.10'

* Update developers list in pom.xml

* JGit v4.9.1.201712030800-r
* Silence API warnings for reintroduced ResolveMerger#processEntry

* Add missing online help for Ketch server type option in CLI daemon

* Fix TransportException when reading bundle

* Refspec: loosen restrictions on wildcard "*"

* JGit v4.2.0.201512141825-rc1
* Merge branch 'master' into stable-4.2

* Raise error if FileNotFoundException is caught for an existing file

* SignedPushConfig: Allow setting a custom nonce generator impl
* PackCertificateParser: return null if nothing was received
* Include push certificates in RefUpdate
* Remove redundant @since tags in new signed push classes

* Treat CloneCommand.setBranch(null) as setBranch("HEAD")
* Treat CloneCommand.setRemote(null) as setRemote("origin")
* Document CloneCommand.setURI(null)
* Handle null in ProgressMonitor setters
* Document CloneCommand.setDirectory(null) and setGitDir(null) more clearly

* Merge branch 'stable-3.7'

* Support for the pre-commit hook
* Fix FileUtils.testRelativize_mixedCase which failed on Mac OS X

* Use bitcheck to check for presence of OPT_FULL option

* JGit v3.4.0.201405211411-rc1

* Allow adding single refs or all tags to NameRevCommand

* Try to send HTTP error messages over sideband
* Extract the capability parsing logic in {Upload,Receive}Pack
* Make capability strings in BasePack{Fetch,Push}Connection public
* Fix a typo in "capabilities" in ReceivePack

* Update Eclipse IP log for 1.0