Update tests to record the number of events fired post-setup and only
assert for events fired during BatchRefUpdate.execute. For tests which
use writeLooseRef to setup refs, create new tests which assert the
number of RefsChangedEvent(s) rather than updating the existing ones
to call RefDirectory.exactRef as it changes the code path.
Change-Id: I0187811628d179d9c7e874c9bb8a7ddb44dd9df4
Signed-off-by: Kaushik Lingarkar <quic_kaushikl@quicinc.com>
If pack or index files are guarded by a pack lock (.keep file)
deleteOrphans() should not touch the respective files protected by the
lock file. Otherwise it may interfere with PackInserter concurrently
inserting a new pack file and its index.
The problem was caused by the following race.
All mentioned files are located in "objects/pack/".
File endings relevant in "pack" dir:
.pack
.keep
.idx
.bitmap
When ReceivePack receives a pack file it executes the following steps:
ReceivePack.service():
receivePackAndCheckConnectivity():
receivePack():
receive the pack
parse the pack, returns packLock (.keep file)
PackInserter.flush():
write tmpPck file: "insert_<random>.pack"
write tmpIdx file: "insert_<random>.idx"
real pack name: "pack-<SHA1>.pack"
real index name: "pack-<SHA1>.idx"
atomic rename tmpPack to realPack
atomic rename tmpIdx to tmpIdx
execute commands
unlock pack by removing .keep file
trigger auto gc if enabled
When PackInserter.flush() renames the temporary pack to the final
"pack-xxx.pack" file the temporary pack index file "insert_xxx.idx"
has no matching .pack file with the same base name for a short interval.
If deleteOrphans() ran during that interval it deduced the pack index
file was orphaned. Subsequently the missing pack index caused
MissingObjectExceptions since objects contained in the pack couldn't be
looked up anymore.
Bug: https://bugs.chromium.org/p/gerrit/issues/detail?id=13544
Change-Id: I559c81e4b1d7c487f92a751bd78b987d32c98719
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
WindowCache: add option to use strong refs to reference ByteWindows
Java GC evicts all SoftReferences when the used heap size comes close to
the maximum heap size. This means peaks in heap memory consumption can
flush the complete WindowCache which was observed to have negative
impact on performance of upload-pack in Gerrit.
Hence add a boolean option core.packedGitUseStrongRefs to allow using
strong references to reference packfile pages cached in the WindowCache.
If this option is set to true Java gc can no longer flush the
WindowCache to free memory if the used heap comes close to the maximum
heap size. On the other hand this provides more predictable performance.
Bug: 553573
Change-Id: I9de406293087ab0fa61130c8e0829775762ece8d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Add the following statistics
- cache hit count and hit ratio
- cache miss count and miss ratio
- count of successful and failed loads
- rate of failed loads
- load, eviction and request count
- average and total load time
Use LongAdder instead of AtomicLong to implement counters in order to
improve scalability.
Optionally expose these metrics via JMX, they are registered with the
platform MBean server if the config option jmx.WindowCacheStats = true
in the user or system level git config.
Bug: 553573
Change-Id: Ia2d5246ef69b9c2bd594a23934424bc5800774aa
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
BatchRefUpdate: repro racy atomic update, and fix it
PackedBatchRefUpdate was creating a new packed-refs list that was
potentially unsorted. This would be papered over when the list was
read back from disk in parsePackedRef, which detects unsorted ref
lists on reading, and sorts them. However, the BatchRefUpdate also
installed the new (unsorted) list in-memory in
RefDirectory#packedRefs.
With the timestamp granularity code committed to stable-5.1, we can
more often accurately decide that the packed-refs file is clean, and
will return the erroneous unsorted data more often. Unluckily timed
delays also cause the file to be clean, hence this problem was
exacerbated under load.
The symptom is that refs added by a BatchRefUpdate would stop being
visible directly after they were added. In particular, the Gerrit
integration tests uses BatchRefUpdate in its setup for creating the
Admin group, and then tries to read it out directly afterward.
The tests recreates one failure case. A better approach would be to
revise RefList.Builder, so it detects out-of-order lists and
automatically sorts them.
Fixes https://bugs.eclipse.org/bugs/show_bug.cgi?id=548716 and
https://bugs.chromium.org/p/gerrit/issues/detail?id=11373.
Bug: 548716
Change-Id: I613c8059964513ce2370543620725b540b3cb6d1
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Previously, the API did not enforce ordering of writes. Misuse of
this API would lead to data effectively being lost.
Guard against that with IllegalArgumentException, and add a test.
Change-Id: I04f55c481d60532fc64d35fa32c47037a03988ae
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
reftable: fix seeking to refs in reflog implementation
Small reftables omit the log index. Currently,
ReftableWriter#shouldHaveIndex does this if there is a single-block
log, but other writers could decide on different criteria.
In the case that the log index is missing, we have to linearly search
for the right block. It is never appropriate to use binary search on
blocks for log data, as the blocks are compressed and therefore
irregularly sized.
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Change-Id: Id59874edf6bf45c7dec502d9465888e077ffe198
LocalDiskRefTreeDatabaseTest shall use MockSystemReader
It missed to call the setup() method of its super class which prepares
the MockSystemReader
Change-Id: I39858749f8d0115fc6ac7edc8847ffb2bbc85c33
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
If we use the default system reader FileStoreAttributes cannot persist
attributes in userConfig when tests run in Bazel due to sandboxing.
Hence we need to ensure that all tests use MockSystemReader (and
especially a mocked userConfig).
Change-Id: Ic1ad8e2ec5a150c5433434a5f6667d6c4674c87d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
[error prone] suppress AmbiguousMethodReference in AnyObjectId
Move the implementation of the static equals() method to a new method
and suppress the error. Deprecate the old method to signal that we
intend to remove it in the next major release.
See https://errorprone.info/bugpattern/AmbiguousMethodReference
Change-Id: I5e29c97f4db3e11770be589a6ccd785e2c9ac7f2
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Increase the safety factor to 2.5x for extra safety if max of measured
timestamp resolution and measured minimal racy threshold is < 100ms, use
1.25 otherwise since for large filesystem resolution values the
influence of finite resolution of the system clock should be negligible.
Before, not yet using the newly introduced minRacyThreshold measurement,
the threshold was 1.1x FS resolution, and we could issue the
following sequence of events,
start
create-file
read-file (currentTime)
end
which had the following timestamps:
create-file 1564589081
start 1564589082
read 1564589082
end 1564589082
In this case, the difference between create-file and read is 5ms,
which exceeded the 4ms FS resolution, even though the events together
took just 2ms of runtime.
Reproduce with:
bazel test --runs_per_test=100 \
//org.eclipse.jgit.test:org_eclipse_jgit_internal_storage_file_FileSnapshotTest
The file system timestamp resolution is 4ms in this case.
This code assumes that the kernel and the JVM use the same clock that
is synchronized with the file system clock. This seems plausible,
given the resolution of System.currentTimeMillis() and the latency for
a gettimeofday system call (typically ~1us), but it would be good to
justify this with specifications.
Also cover a source of flakiness: if the test runs under extreme load,
then we could have
start
create-file
<long delay>
read
end
which would register as an unmodified file. Avoid this by skipping the
test if end-start is too big.
[msohn]:
- downported from master to stable-5.1
- skip test if resolution is below 10ms
- adjust safety factor to 1.25 for resolutions above 100ms
Change-Id: I87d2cf035e01c44b7ba8364c410a860aa8e312ef
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Persist minimal racy threshold and allow manual configuration
To enable persisting the minimal racy threshold per FileStore add a
new config option to the user global git configuration:
- Config section is "filesystem"
- Config subsection is concatenation of
- Java vendor (system property "java.vendor")
- Java version (system property "java.version")
- FileStore's name, on Windows we use the attribute volume:vsn instead
since the name is not necessarily unique.
- separated by '|'
e.g.
"AdoptOpenJDK|1.8.0_212-b03|/dev/disk1s1"
The same prefix is used as for filesystem timestamp resolution, so
both values are stored in the same config section
- The config key for minmal racy threshold is "minRacyThreshold" as a
time value, supported time units are those supported by
DefaultTypedConfigGetter#getTimeUnit
- measure for 3 seconds to limit runtime which depends on hardware, OS
and Java version being used
If the minimal racy threshold is configured for a given FileStore the
configured value is used instead of measuring it.
When the minimal racy threshold was measured it is persisted in the user
global git configuration.
Rename FileStoreAttributeCache to FileStoreAttributes since this class
is now declared public in order to enable exposing all attributes in one
object.
Example:
[filesystem "AdoptOpenJDK|11.0.3|/dev/disk1s1"]
timestampResolution = 7000 nanoseconds
minRacyThreshold = 3440 microseconds
Change-Id: I22195e488453aae8d011b0a8e3276fe3d99deaea
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Also-By: Marc Strapetz <marc.strapetz@syntevo.com>
Measure minimum racy interval to auto-configure FileSnapshot
By running FileSnapshotTest#detectFileModified we found that the sum of
measured filesystem timestamp resolution and measured clock resolution
may yield a too small interval after a file has been modified which we
need to consider racily clean. In our tests we didn't find this behavior
on all systems we tested on, e.g. on MacOS using APFS and Java 8 and 11
this effect was not observed.
On Linux (SLES 15, kernel 4.12.14-150.22-default) we collected the
following test results using Java 8 and 11:
In 23-98% of 10000 test runs (depending on filesystem type and Java
version) the test failed, which means the effective interval which needs
to be considered racily clean after a file was modified is larger than
the measured file timestamp resolution.
"delta" is the observed interval after a file has been modified but
FileSnapshot did not yet detect the modification:
"resolution" is the measured sum of file timestamp resolution and clock
resolution seen in Java.
Java version filesystem failures resolution min delta max delta
1.8.0_212-b04 btrfs 98.6% 1 ms 3.6 ms 6.6 ms
1.8.0_212-b04 ext4 82.6% 3 ms 1.1 ms 4.1 ms
1.8.0_212-b04 xfs 23.8% 4 ms 3.7 ms 3.9 ms
1.8.0_212-b04 zfs 23.1% 3 ms 4.8 ms 5.0 ms
11.0.3+7 btrfs 98.1% 3 us 0.7 ms 4.7 ms
11.0.3+7 ext4 98.1% 6 us 0.7 ms 4.7 ms
11.0.3+7 xfs 98.5% 7 us 0.1 ms 8.0 ms
11.0.3+7 zfs 98.4% 7 us 0.7 ms 5.2 ms
Mac OS
1.8.0_212 APFS 0% 1 s
11.0.3+7 APFS 0% 6 us
The observed delta is not distributed according to a normal gaussian
distribution but rather random in the observed range between "min delta"
and "max delta".
Run this test after measuring file timestamp resolution in
FS.FileAttributeCache to auto-configure JGit since it's unclear what
mechanism is causing this effect.
In FileSnapshot#isRacyClean use the maximum of the measured timestamp
resolution and the measured "delta" as explained above to decide if a
given FileSnapshot is to be considered racily clean. Add a 30% safety
margin to ensure we are on the safe side.
Change-Id: I1c8bb59f6486f174b7bbdc63072777ddbe06694d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
These are useful to avoid typos, and also for tab completion.
Change-Id: I0f2d267e46b36bc40297c9657c447f3fd8b9f831
Signed-off-by: David Turner <dturner@twosigma.com>
Repeat the test 10000 times to get statistics if measured
fsTimestampResolution is working in practice to detect racy git
situations.
Add a class to compute statistics for this test. Log delta between
lastModified and time when FileSnapshot failed to detect modification.
This happens if the racy git limit determined by measuring filesystem
timestamp resolution and clock resolution is too small. If it would be
correct FileSnapshot would always detect modification or mark it
modified if time since modification is smaller than the racy git limit.
Change-Id: Iabe7af1a7211ca58480f8902d4fa4e366932fc77
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Repeat RefDirectoryTest.testGetRef_DiscoversModifiedLoose 100 times
This should help to detect if measured fsTimeResolution is too small.
Change-Id: Id1f54dbdedb52b17859904e47776fa3a5887b8be
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Fix FileSnapshotTests for filesystem with high timestamp resolution
When filesystem timestamp resolution is very high some tests don't work
since runtime of the test setup is too long to reach a racily clean
FileSnapshot. Hence skip these tests when timestamp resolution is higher
than 10 millisecond.
Change-Id: Ie47dd10eda22037b5c1ebff6b6becce0654ea807
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Measure filesystem timestamp resolution already in test setup
This helps to avoid some time critical tests can't prepare the test
fixture intended since measuring timestamp resolution takes time.
Change-Id: Ib34023e682a106070ca97e98ef16789a4dfb97b4
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
- use Path instead of File
- create test directories, files and output stream using Files methods
- delete unused list "files"
Change-Id: I8c5c601eca9f613efb5618d33b262277df92a06a
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Use Instant instead of milliseconds for filesystem timestamp handling
This enables higher file timestamp resolution on filesystems like ext4,
Mac APFS (1ns) or NTFS (100ns) providing high timestamp resolution on
filesystem level.
Note:
- on some OSes Java 8,9 truncate milliseconds, see
https://bugs.openjdk.java.net/browse/JDK-8177809, fixed in Java 10
- UnixFileAttributes truncates timestamp resolution to microseconds when
converting the internal representation to FileTime exposed in the API,
see https://bugs.openjdk.java.net/browse/JDK-8181493
- WindowsFileAttributes also provides only microsecond resolution
Change-Id: I25ffff31a3c6f725fc345d4ddc2f26da3b88f6f2
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Add a unittest.
In commit I5485db55 ("Fix FileSnapshot's consideration of file size"),
the special casing of UNKNOWN_SIZE was forgotten.
This change, together with I493f3b57b ("Measure file timestamp
resolution used in FileSnapshot") introduced a regression that would
occasionally surface in Gerrit integration tests marked UseLocalDisk,
with the symptom that creating the Admin user in NoteDb failed with a
LOCK_FAILURE.
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Change-Id: I7ffd972581f815c144f810481103c7985af5feb0
As reported by Error Prone:
An inner class should be static unless it references members of its
enclosing class. An inner class that is made non-static unnecessarily
uses more memory and does not make the intent of the class clear.
See https://errorprone.info/bugpattern/ClassCanBeStatic
Change-Id: Ib99d120532630dba63cf400cc1c61c318286fc41
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
(cherry picked from commit ee40efcea4)
ErrorProne: Increase severity of FutureReturnValueIgnored to ERROR
The only remaining code where the return value is ignored is in tests.
Update them to store the value and perform a basic assertion.
Change-Id: I29ef5bd5dd0648aac3490f9e47ecc74544109652
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Test that JGit detects that packfiles have changed even if they are
repacked multiple times in one tick of the filesystem timer.
Test that this detection works also when repacking doesn't change the
length or the filekey of the packfile. In this case where a modified
file can't be detected by looking at file metadata JGit should still
detect too fast modification by racy git checks and trigger rescanning
the pack list and consequently rereading of packfile content.
Change-Id: I67682cfb807c58afc6de9375224ff7489d6618fb
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Extend FileSnapshot for packfiles to also use checksum to detect changes
If the attributes of FileSnapshot don't detect modification of a
packfile read the packfile's checksum and compare it against the
checksum cached in the loaded packfile.
Since reading the checksum needs less IO than reloading the complete
packfile this may help to reduce the overhead to detect modficiation
when a gc completes while ObjectDirectory scans for packfiles in another
thread.
Bug: 546891
Change-Id: I9811b497eb11b8a85ae689081dc5d949ca8c4be5
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Capture reason for result of FileSnapshot#isModified
This allows to verify the expected behavior in
FileSnapshotTest#testSimulatePackfileReplacement and enables extending
FileSnapshot for packfiles to read the packfile's checksum as another
criterion to detect modifications without reading the full content.
Also add another field capturing the result of the last check if
lastModified was racily clean.
Remove unnecessary determination of raciness in the constructor. It was
determined twice in all relevant cases.
Change-Id: I100a2f49d7949693d7b72daa89437e166f1dc107
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Skip FileSnapshotTest#testSimulatePackfileReplacement on Windows
NTFS does not support FileKey hence ignore this test on Windows.
Change-Id: I7b53a591daa5e03eb5e401b5b26d612ab68ce10d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Fix FileSnapshotTest.testNewFileNoWait() to match its javadoc
testNewFileNoWait() was identical to testNewFileWithWait() but claims it
doesn't wait at all. Hence remove the waits.
Change-Id: I49b8ca5cb49a43c55fe61870c18c42f32fb4b74d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Include filekey file attribute when comparing FileSnapshots
Due to finite filesystem timestamp resolution the last modified
timestamp of files cannot detect file changes which happened in the
immediate past (less than one filesystem timer tick ago).
Some filesystems expose unique file identifiers, e.g. inodes in Posix
filesystems which are named filekeys in Java's BasicFileAttributes. Use
them as another means to detect file modifications based on stat
information.
Running git gc on a repository yields a new packfile with the same id as
a packfile which existed before the gc if these packfiles contain the
same set of objects. The content of the old and the new packfile might
differ if a different PackConfig was used when writing the packfile.
Considering filekeys in FileSnapshot may help to detect such packfile
modifications.
Bug: 546891
Change-Id: I711a80328c55e1a31171d540880b8e80ec1fe095
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Fix pack files scan when filesnapshot isn't modified
Do not reload packfiles when their associated filesnapshot is not
modified on disk compared to the one currently stored in memory.
Fix the regression introduced by fef78212 which, in conjunction with
core.trustfolderstats = false, caused any lookup of objects inside
the packlist to loop forever when the object was not found in the pack
list.
Bug: 546190
Change-Id: I38d752ebe47cefc3299740aeba319a2641f19391
Signed-off-by: Luca Milanesio <luca.milanesio@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Introduce RefDatabase#getTipsWithSha1 to list refs pointing to object
Add resolveTipSha1, an inverse of exactRef(String ...), to RefDatabase
and provide a default implementation that runs in O(n) time where n is
the number of refs. For RefTable, provide an implementation that runs
in O(log(n)) time.
[ifrade@google.com: with tests in InMemoryRepositoryTest to exercise
the reftable code path, too]
Change-Id: I2811ccd0339cdc1c74b42cce2ea003f07a2ce9e1
Signed-off-by: Patrick Hiesel <hiesel@google.com>
Signed-off-by: Ivan Frade <ifrade@google.com>
DfsRefDatabase: Keep update index when peeling a reference
The new references created in the peeling do not receive the update
index. In other words, the update index of a reference (if set) is lost
in the peeling.
Pass-through the update index to the newly created references.
Tested via InMemoryRepository, which uses DfsReftableDatabase.
Change-Id: I7ff7c737a9c3366fdec296a4d9b2e51d10227957
Signed-off-by: Ivan Frade <ifrade@google.com>
Fix GC to delete empty fanout directories after repacking
The prune method did not delete empty fanout directories when loose
objects moved to a new pack file but only when loose unreferenced
objects were pruned.
Change-Id: Ia068f4914c54d9cf9f40b75e8ea50759402b5000
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Due to finite filesystem timestamp resolution the last modified
timestamp of files cannot detect file changes which happened in the
immediate past (less than one filesystem timer tick ago).
Read and consider file size also, so that differing file size can help
to more accurately detect file changes without reading the file content.
Use bulk read to avoid multiple stat calls to retrieve file attributes.
Change-Id: I974288fff78ac78c52245d9218b5639603f67a46
Signed-off-by: Luca Milanesio <luca.milanesio@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Deprecate the method in favor of setEncoding(Charset).
Update the only caller in the code base that was still using
the deprecated variant.
Change-Id: I6357f2d0c727007013c72e9d5b7c72a3f5f3f2b1
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Fix bug in copyPackBypassCache's skip 'PACK' header logic
Bug caused the pack to be 12 bytes short when cold cache. Also added
test for copyPackAsIs method.
Change-Id: Idf8fb0e50d1215245d4b032e2e00df4b218c115f
Signed-off-by: Minh Thai <mthai@google.com>
This method tried to iterate spurious files which may exist in the
.git/refs folder, e.g. on Mac a .DS_Store may have been created there by
inspecting the folder using the finder application. This led to a
NotDirectoryException when deleteEmptyRefsFolders tried to create an
iterator for such a file entry. Skip files contained in the refs folder
to ensure the method only tries to iterate contained folders but not
files.
Change-Id: I5f31e733072a35db1e93908a9c69a8891ae5c206
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Its implementation contains
} catch (IOException e) {
// Legacy API, assume error means "no"
return false;
}
Better to use ObjectDatabase#has, which throws IOException to report
errors.
Change-Id: I7de02f7ceb8f57b2a8ebdb16d2aa4376775ff933
Signed-off-by: Jonathan Nieder <jrn@google.com>
RefDirectory: Do not use search path to find additional refs
Psuedorefs like FETCH_HEAD and MERGE_HEAD are supposed to be directly
under the .git directory, not in other locations in the SEARCH_PATH
like refs/ and refs/heads/. Use exactRef to access them.
Change-Id: Iab8ac47008822fa78fc0691e239e518c34d7a98e
Signed-off-by: Jonathan Nieder <jrn@google.com>
Kaushik Lingarkar
Matthias Sohn
Han-Wen Nienhuys
David Turner
David Pursehouse
Christian Halstrick
Carsten Hammer
Luca Milanesio
Patrick Hiesel
Ivan Frade
Minh Thai
Jonathan Nieder