* stable-5.1:
Fix NPE in RebaseTodoFile#parseComments
Fix NPE in ObjectIdOwnerMap#get
Fix NPE in CommitOnlyTest#getHead
FileUtils#lastModifiedInstant should not log error if path doesn't exist
Cache user global and system-wide git configurations
Avoid setup and saving FileStoreAttributes compete for ~/.gitconfig lock
Add missing dependencies for running FS_POSIXTest in Eclipse
Fix javadoc for SystemReader#getInstance
Improve retry handling when saving FileStoreAttributes fails
Ensure FSTest uses MockSystemReader
Make supportsAtomicCreateNewFile return true as default
Update orbit to R20190602212107-2019-06 to enable backports from master
Handle InvalidPathException in FS_POSIX#createNewFileAtomic
Ensure root cause of lock creation failures is logged
Implement toString in MockSystemReader and MockConfig
LocalDiskRefTreeDatabaseTest shall use MockSystemReader
Ensure LocalDiskRepositoryTestCase#setup fully uses MockSystemReader
Ensure we use MockSystemReader in tests
Override FileBasedConfig's save method in MockConfig
Remove FileBasedConfig.load(boolean) introduced in d45219ba
Disable debug log for FS in org.eclipse.jgit.test
Bazel: enable logging for tests in org.eclipse.jgit.test
LockFile: log exception if creation of lock file failed
Stop using deprecated Constants.CHARACTER_ENCODING
Change-Id: I48c585f3c9287be7d6ddb6b01a1955444e13fa31
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Cache user global and system-wide git configurations
So far the git configuration and the system wide git configuration were
always reloaded when jgit accessed these global configuration files to
access global configuration options which are not in the context of a
single git repository. Cache these configurations in SystemReader and
only reload them if their file metadata observed using FileSnapshot
indicates a modification.
Change-Id: I092fe11a5d95f1c5799273cacfc7a415d0b7786c
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Avoid setup and saving FileStoreAttributes compete for ~/.gitconfig lock
FS determines FileStore attributes in a background thread and tries to
save the results to the global git configuration. This competed with
LocalDiskRepositoryTestCase#setup trying to save changes to the same
file requiring the same lock. This frequently led to one of the threads
failing to acquire the lock.
Fix this by first initiating determination of FileStore attributes which
then uses a MockSystemReader not using a userConfig stored to disk which
avoids this race for the lock.
Change-Id: I30fcd96bc15100f8ef9b2a9eb3320bb5ace97c67
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
The existing javadoc was copied from another method and not adapted.
Change-Id: I39a7e5d719b2c379de9bd1a4710a55a73700c6f0
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Improve retry handling when saving FileStoreAttributes fails
- fix handling of interrupts in FileStoreAttributes#saveToConfig
- increase retry wait time to 100ms
- don't wait after last retry
- dont retry if failure is caused by another exception than
LockFailedException
Change-Id: I108c012717d2bcce71f2c6cb9cf0879de704ebc2
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Tests shall not modify ~/.gitconfig. When running tests with bazel this
test failed since bazel isolates tests in a sandbox.
Change-Id: I7dd092afd14972da58a95eb7c200d353f0959fa1
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Make supportsAtomicCreateNewFile return true as default
The method org.eclipse.jgit.util.FS.supportsAtomicCreateNewFile()
should default to true as mentioned in docs [1]
org.eclipse.jgit.util.FS_POSIX.supportsAtomicCreateNewFile() method
will set the value to false if the git config
core.supportsatomiccreatenewfile is not set.
It should default to true if the configuration is undefined.
[1]
4169a95a65/org.eclipse.jgit/src/org/eclipse/jgit/util/FS_POSIX.java (L372)
Bug: 544164
Change-Id: I16ccf989a89da2cf4975c200b3228b25ba4c0d55
Signed-off-by: Vishal Devgire <vishaldevgire@gmail.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
LocalDiskRefTreeDatabaseTest shall use MockSystemReader
It missed to call the setup() method of its super class which prepares
the MockSystemReader
Change-Id: I39858749f8d0115fc6ac7edc8847ffb2bbc85c33
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
FS#getFileStoreAttributes used the real userConfig and not the mocked
one. This led to test errors when running tests with Bazel since it
sandboxes tests which prevents they can write to ~/.gitconfig.
Fix this by first preparing the MockedSystemReader and the mocked config
before calling FS#getFileStoreAttributes.
Also fix ConfigTest which broke due to this change since it inherits
from LocalDiskRepositoryTestCase and calls its setup method which was
changed here. We can no longer assert by comparing plain text since FS
adds FileStoreAttributes to the mocked userConfig. Also the default
options seen by this test changed since we now use a mocked config.
Change-Id: I76bc7c94953fe979266147d3b309a68dda9d4dfe
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
If we use the default system reader FileStoreAttributes cannot persist
attributes in userConfig when tests run in Bazel due to sandboxing.
Hence we need to ensure that all tests use MockSystemReader (and
especially a mocked userConfig).
Change-Id: Ic1ad8e2ec5a150c5433434a5f6667d6c4674c87d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Override FileBasedConfig's save method in MockConfig
This ensures we don't try to persist MockConfig using its superclasses
save() method which fails with an NPE since MockConfig has no backing
file.
Change-Id: Ifba2d24c9438bb30d3828ed31a4c131f940b45eb
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Remove FileBasedConfig.load(boolean) introduced in d45219ba
We can't add this method to the super class StoredConfig since that
abstracts from filesystem storage. MockSystemReader.MockConfig is a
StoredConfig and is also used by tests for dfs based storage. Hence
remove this leaky abstraction.
This implies we always use the fallback FileStoreAttributes which means
a config file modification is considered racy within the first 2
seconds. This should not be an issue since typically configs change
rarely and re-reading a config within the racy period is relatively
cheap since configs are small.
Change-Id: Ia2615addc24a7cadf3c566ee842c6f4f07e159a5
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
This was enabled unintentionally in 06fc6c7c and spams the test logs. We
can enable this when needed.
Change-Id: I9f3042c0e285ff236be65fcc02bdcfdb90efc3af
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Bazel: enable logging for tests in org.eclipse.jgit.test
- use slf4j-simple for logging in test runs
- for log configuration see
https://www.slf4j.org/api/org/slf4j/impl/SimpleLogger.html
Change-Id: I9f0a532644b31162c867cd0d63f083296eaf6be5
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.2:
Fix OpenSshConfigTest#config
FileSnapshot: fix bug with timestamp thresholding
In LockFile#waitForStatChange wait in units of file time resolution
Cache FileStoreAttributeCache per directory
Fix FileSnapshot#save(long) and FileSnapshot#save(Instant)
Persist minimal racy threshold and allow manual configuration
Measure minimum racy interval to auto-configure FileSnapshot
Reuse FileUtils to recursively delete files created by tests
Fix FileAttributeCache.toString()
Add test for racy git detection in FileSnapshot
Repeat RefDirectoryTest.testGetRef_DiscoversModifiedLoose 100 times
Fix org.eclipse.jdt.core.prefs of org.eclipse.jgit.junit
Add missing javadoc in org.eclipse.jgit.junit
Enhance RepeatRule to report number of failures at the end
Fix FileSnapshotTests for filesystem with high timestamp resolution
Retry deleting test files in FileBasedConfigTest
Measure filesystem timestamp resolution already in test setup
Refactor FileSnapshotTest to use NIO APIs
Measure stored timestamp resolution instead of time to touch file
Handle CancellationException in FileStoreAttributeCache
Fix FileSnapshot#saveNoConfig
Use Instant for smudge time in DirCache and DirCacheEntry
Use Instant instead of milliseconds for filesystem timestamp handling
Workaround SecurityException in FS#getFsTimestampResolution
Fix NPE in FS$FileStoreAttributeCache.getFsTimestampResolution
FS: ignore AccessDeniedException when measuring timestamp resolution
Add debug trace for FileSnapshot
Use FileChannel.open to touch file and set mtime to now
Persist filesystem timestamp resolution and allow manual configuration
Increase bazel timeout for long running tests
Bazel: Fix lint warning flagged by buildifier
Update bazlets to latest version
Bazel: Add missing dependencies for ArchiveCommandTest
Bazel: Remove FileTreeIteratorWithTimeControl from BUILD file
Add support for nanoseconds and microseconds for Config#getTimeUnit
Optionally measure filesystem timestamp resolution asynchronously
Delete unused FileTreeIteratorWithTimeControl
FileSnapshot#equals: consider UNKNOWN_SIZE
Timeout measuring file timestamp resolution after 2 seconds
Fix RacyGitTests#testRacyGitDetection
Change RacyGitTests to create a racy git situation in a stable way
Deprecate Constants.CHARACTER_ENCODING in favor of
StandardCharsets.UTF_8
Fix non-deterministic hash of archives created by ArchiveCommand
Update Maven plugins ecj, plexus, error-prone
Update Maven plugins and cleanup Maven warnings
Make inner classes static where possible
Fix API problem filters
Change-Id: I238adfd3080a5fed9d64c3c757297da6ea893918
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
* stable-5.1:
Fix OpenSshConfigTest#config
FileSnapshot: fix bug with timestamp thresholding
In LockFile#waitForStatChange wait in units of file time resolution
Cache FileStoreAttributeCache per directory
Fix FileSnapshot#save(long) and FileSnapshot#save(Instant)
Persist minimal racy threshold and allow manual configuration
Measure minimum racy interval to auto-configure FileSnapshot
Reuse FileUtils to recursively delete files created by tests
Fix FileAttributeCache.toString()
Add test for racy git detection in FileSnapshot
Repeat RefDirectoryTest.testGetRef_DiscoversModifiedLoose 100 times
Fix org.eclipse.jdt.core.prefs of org.eclipse.jgit.junit
Add missing javadoc in org.eclipse.jgit.junit
Enhance RepeatRule to report number of failures at the end
Fix FileSnapshotTests for filesystem with high timestamp resolution
Retry deleting test files in FileBasedConfigTest
Measure filesystem timestamp resolution already in test setup
Refactor FileSnapshotTest to use NIO APIs
Measure stored timestamp resolution instead of time to touch file
Handle CancellationException in FileStoreAttributeCache
Fix FileSnapshot#saveNoConfig
Use Instant for smudge time in DirCache and DirCacheEntry
Use Instant instead of milliseconds for filesystem timestamp handling
Workaround SecurityException in FS#getFsTimestampResolution
Fix NPE in FS$FileStoreAttributeCache.getFsTimestampResolution
FS: ignore AccessDeniedException when measuring timestamp resolution
Add debug trace for FileSnapshot
Use FileChannel.open to touch file and set mtime to now
Persist filesystem timestamp resolution and allow manual configuration
Increase bazel timeout for long running tests
Bazel: Fix lint warning flagged by buildifier
Update bazlets to latest version
Bazel: Add missing dependencies for ArchiveCommandTest
Bazel: Remove FileTreeIteratorWithTimeControl from BUILD file
Add support for nanoseconds and microseconds for Config#getTimeUnit
Optionally measure filesystem timestamp resolution asynchronously
Delete unused FileTreeIteratorWithTimeControl
FileSnapshot#equals: consider UNKNOWN_SIZE
Timeout measuring file timestamp resolution after 2 seconds
Fix RacyGitTests#testRacyGitDetection
Change RacyGitTests to create a racy git situation in a stable way
Deprecate Constants.CHARACTER_ENCODING in favor of StandardCharsets.UTF_8
Fix non-deterministic hash of archives created by ArchiveCommand
Update Maven plugins ecj, plexus, error-prone
Update Maven plugins and cleanup Maven warnings
Make inner classes static where possible
Fix API problem filters
Change-Id: Ia57385b2a60f48a5317c8d723721c235d7043a84
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
- use FS.DETECTED instead of db.getFS() since the ssh config is
typically in a different place than the repository, the same is used in
OpenSshConfig
- reduce unnecessary repeated writes by introducing wait for one tick of
the file time resolution
Change-Id: Ifac915e97ff420ec5cf8e2f162e351f9f51b6b14
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Increase the safety factor to 2.5x for extra safety if max of measured
timestamp resolution and measured minimal racy threshold is < 100ms, use
1.25 otherwise since for large filesystem resolution values the
influence of finite resolution of the system clock should be negligible.
Before, not yet using the newly introduced minRacyThreshold measurement,
the threshold was 1.1x FS resolution, and we could issue the
following sequence of events,
start
create-file
read-file (currentTime)
end
which had the following timestamps:
create-file 1564589081
start 1564589082
read 1564589082
end 1564589082
In this case, the difference between create-file and read is 5ms,
which exceeded the 4ms FS resolution, even though the events together
took just 2ms of runtime.
Reproduce with:
bazel test --runs_per_test=100 \
//org.eclipse.jgit.test:org_eclipse_jgit_internal_storage_file_FileSnapshotTest
The file system timestamp resolution is 4ms in this case.
This code assumes that the kernel and the JVM use the same clock that
is synchronized with the file system clock. This seems plausible,
given the resolution of System.currentTimeMillis() and the latency for
a gettimeofday system call (typically ~1us), but it would be good to
justify this with specifications.
Also cover a source of flakiness: if the test runs under extreme load,
then we could have
start
create-file
<long delay>
read
end
which would register as an unmodified file. Avoid this by skipping the
test if end-start is too big.
[msohn]:
- downported from master to stable-5.1
- skip test if resolution is below 10ms
- adjust safety factor to 1.25 for resolutions above 100ms
Change-Id: I87d2cf035e01c44b7ba8364c410a860aa8e312ef
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
In LockFile#waitForStatChange wait in units of file time resolution
Since we now measure file time resolution we can use it to replace the
hard coded wait time of 25ms. FileSnapshot#equals will return true until
the mtime of the old (o) and the new FileSnapshot (n) differ by at least
one file time resolution.
Change-Id: Icb713a80ce9eb929242ed083406bfb6650c72223
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Cache FileStoreAttributeCache entries since looking up FileStore for a
file may be expensive on some platforms.
Implement a simple LRU cache based on ConcurrentHashMap using a simple
long counter to order access to cache entries.
Change-Id: I4881fa938ad2f17712c05da857838073a2fc4ddb
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Signed-off-by: Marc Strapetz <marc.strapetz@syntevo.com>
Also-By: Marc Strapetz <marc.strapetz@syntevo.com>
Fix FileSnapshot#save(long) and FileSnapshot#save(Instant)
Use the fallback timestamp resolution as already described in the
javadoc of these methods. Using zero file timestamp resolution doesn't
make sense.
Change-Id: Iaad2a0f99c3be3678e94980a0a368181b6aed38c
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Persist minimal racy threshold and allow manual configuration
To enable persisting the minimal racy threshold per FileStore add a
new config option to the user global git configuration:
- Config section is "filesystem"
- Config subsection is concatenation of
- Java vendor (system property "java.vendor")
- Java version (system property "java.version")
- FileStore's name, on Windows we use the attribute volume:vsn instead
since the name is not necessarily unique.
- separated by '|'
e.g.
"AdoptOpenJDK|1.8.0_212-b03|/dev/disk1s1"
The same prefix is used as for filesystem timestamp resolution, so
both values are stored in the same config section
- The config key for minmal racy threshold is "minRacyThreshold" as a
time value, supported time units are those supported by
DefaultTypedConfigGetter#getTimeUnit
- measure for 3 seconds to limit runtime which depends on hardware, OS
and Java version being used
If the minimal racy threshold is configured for a given FileStore the
configured value is used instead of measuring it.
When the minimal racy threshold was measured it is persisted in the user
global git configuration.
Rename FileStoreAttributeCache to FileStoreAttributes since this class
is now declared public in order to enable exposing all attributes in one
object.
Example:
[filesystem "AdoptOpenJDK|11.0.3|/dev/disk1s1"]
timestampResolution = 7000 nanoseconds
minRacyThreshold = 3440 microseconds
Change-Id: I22195e488453aae8d011b0a8e3276fe3d99deaea
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Also-By: Marc Strapetz <marc.strapetz@syntevo.com>
Measure minimum racy interval to auto-configure FileSnapshot
By running FileSnapshotTest#detectFileModified we found that the sum of
measured filesystem timestamp resolution and measured clock resolution
may yield a too small interval after a file has been modified which we
need to consider racily clean. In our tests we didn't find this behavior
on all systems we tested on, e.g. on MacOS using APFS and Java 8 and 11
this effect was not observed.
On Linux (SLES 15, kernel 4.12.14-150.22-default) we collected the
following test results using Java 8 and 11:
In 23-98% of 10000 test runs (depending on filesystem type and Java
version) the test failed, which means the effective interval which needs
to be considered racily clean after a file was modified is larger than
the measured file timestamp resolution.
"delta" is the observed interval after a file has been modified but
FileSnapshot did not yet detect the modification:
"resolution" is the measured sum of file timestamp resolution and clock
resolution seen in Java.
Java version filesystem failures resolution min delta max delta
1.8.0_212-b04 btrfs 98.6% 1 ms 3.6 ms 6.6 ms
1.8.0_212-b04 ext4 82.6% 3 ms 1.1 ms 4.1 ms
1.8.0_212-b04 xfs 23.8% 4 ms 3.7 ms 3.9 ms
1.8.0_212-b04 zfs 23.1% 3 ms 4.8 ms 5.0 ms
11.0.3+7 btrfs 98.1% 3 us 0.7 ms 4.7 ms
11.0.3+7 ext4 98.1% 6 us 0.7 ms 4.7 ms
11.0.3+7 xfs 98.5% 7 us 0.1 ms 8.0 ms
11.0.3+7 zfs 98.4% 7 us 0.7 ms 5.2 ms
Mac OS
1.8.0_212 APFS 0% 1 s
11.0.3+7 APFS 0% 6 us
The observed delta is not distributed according to a normal gaussian
distribution but rather random in the observed range between "min delta"
and "max delta".
Run this test after measuring file timestamp resolution in
FS.FileAttributeCache to auto-configure JGit since it's unclear what
mechanism is causing this effect.
In FileSnapshot#isRacyClean use the maximum of the measured timestamp
resolution and the measured "delta" as explained above to decide if a
given FileSnapshot is to be considered racily clean. Add a 30% safety
margin to ensure we are on the safe side.
Change-Id: I1c8bb59f6486f174b7bbdc63072777ddbe06694d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Reuse FileUtils to recursively delete files created by tests
Replace redundant complex implementation of recursive delete by the one
in FileUtils.
Change-Id: Iced1468b96c4f32381a9cf0c651b2bf6a9a9af35
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
We should not list the complete cache but only show the cache entry at
hand.
Change-Id: I22be2a4dcbf0145155e23f2389bfcf5662cf23a6
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Repeat the test 10000 times to get statistics if measured
fsTimestampResolution is working in practice to detect racy git
situations.
Add a class to compute statistics for this test. Log delta between
lastModified and time when FileSnapshot failed to detect modification.
This happens if the racy git limit determined by measuring filesystem
timestamp resolution and clock resolution is too small. If it would be
correct FileSnapshot would always detect modification or mark it
modified if time since modification is smaller than the racy git limit.
Change-Id: Iabe7af1a7211ca58480f8902d4fa4e366932fc77
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Repeat RefDirectoryTest.testGetRef_DiscoversModifiedLoose 100 times
This should help to detect if measured fsTimeResolution is too small.
Change-Id: Id1f54dbdedb52b17859904e47776fa3a5887b8be
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Fix org.eclipse.jdt.core.prefs of org.eclipse.jgit.junit
Use the same JDT core settings as used in org.eclipse.jgit but ignore
non-externalized strings.
Change-Id: If30013c76a197e571601a8abc882ac6a99592374
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Enhance RepeatRule to report number of failures at the end
In order to enable counting how frequently a test fails if repeated add
option abortOnFailure. If it is true the test aborts on the first
failure. Otherwise it runs the configured number of repetitions and, if
there was any failure, throws a RepeatException reporting how many of
the test repetitions failed.
Change-Id: Ic47de44d4a6273fddf04b9993ad989903efb40c3
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Fix FileSnapshotTests for filesystem with high timestamp resolution
When filesystem timestamp resolution is very high some tests don't work
since runtime of the test setup is too long to reach a racily clean
FileSnapshot. Hence skip these tests when timestamp resolution is higher
than 10 millisecond.
Change-Id: Ie47dd10eda22037b5c1ebff6b6becce0654ea807
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Measure filesystem timestamp resolution already in test setup
This helps to avoid some time critical tests can't prepare the test
fixture intended since measuring timestamp resolution takes time.
Change-Id: Ib34023e682a106070ca97e98ef16789a4dfb97b4
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
- use Path instead of File
- create test directories, files and output stream using Files methods
- delete unused list "files"
Change-Id: I8c5c601eca9f613efb5618d33b262277df92a06a
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Measure stored timestamp resolution instead of time to touch file
Measure granularity of timestamps stored in the filesystem by setting
and then getting lastModified timestamp until the read value changed.
Increase increment exponentially to limit number of iterations starting
with 1 microsecond since Java's FileTime (up to Java 12) truncates
timestamps to 1 microsecond resolution. The chosen algorithm yields 2000
steps between 1 ms and 2.5 s.
Also measure clock resolution and add that for the total timestamp
resolution. This avoids systematic measurement errors introduced by
doing IO to touch a file.
Change-Id: I9b37138619422452373e298d9d8c7cb2c384db3f
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
We should not use configuration when creating FileSnapshot when
accessing FileBasedConfig.
Change-Id: Ic521632870f18bb004751642b9d30648dd94049a
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Matthias Sohn
David Pursehouse
Vishal Devgire
Han-Wen Nienhuys