You can not select more than 25 topics Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.

HistogramDiff.java 6.5KB

123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140141142143144145146147148149150151152153154155156157158159160161162163164165166167168169170171172173174175176177178179180181182183184185186187188189
  1. /*
  2. * Copyright (C) 2010, Google Inc. and others
  3. *
  4. * This program and the accompanying materials are made available under the
  5. * terms of the Eclipse Distribution License v. 1.0 which is available at
  6. * https://www.eclipse.org/org/documents/edl-v10.php.
  7. *
  8. * SPDX-License-Identifier: BSD-3-Clause
  9. */
  10. package org.eclipse.jgit.diff;
  11. import java.util.ArrayList;
  12. import java.util.List;
  13. /**
  14. * An extended form of Bram Cohen's patience diff algorithm.
  15. * <p>
  16. * This implementation was derived by using the 4 rules that are outlined in
  17. * Bram Cohen's <a href="http://bramcohen.livejournal.com/73318.html">blog</a>,
  18. * and then was further extended to support low-occurrence common elements.
  19. * <p>
  20. * The basic idea of the algorithm is to create a histogram of occurrences for
  21. * each element of sequence A. Each element of sequence B is then considered in
  22. * turn. If the element also exists in sequence A, and has a lower occurrence
  23. * count, the positions are considered as a candidate for the longest common
  24. * subsequence (LCS). After scanning of B is complete the LCS that has the
  25. * lowest number of occurrences is chosen as a split point. The region is split
  26. * around the LCS, and the algorithm is recursively applied to the sections
  27. * before and after the LCS.
  28. * <p>
  29. * By always selecting a LCS position with the lowest occurrence count, this
  30. * algorithm behaves exactly like Bram Cohen's patience diff whenever there is a
  31. * unique common element available between the two sequences. When no unique
  32. * elements exist, the lowest occurrence element is chosen instead. This offers
  33. * more readable diffs than simply falling back on the standard Myers' O(ND)
  34. * algorithm would produce.
  35. * <p>
  36. * To prevent the algorithm from having an O(N^2) running time, an upper limit
  37. * on the number of unique elements in a histogram bucket is configured by
  38. * {@link #setMaxChainLength(int)}. If sequence A has more than this many
  39. * elements that hash into the same hash bucket, the algorithm passes the region
  40. * to {@link #setFallbackAlgorithm(DiffAlgorithm)}. If no fallback algorithm is
  41. * configured, the region is emitted as a replace edit.
  42. * <p>
  43. * During scanning of sequence B, any element of A that occurs more than
  44. * {@link #setMaxChainLength(int)} times is never considered for an LCS match
  45. * position, even if it is common between the two sequences. This limits the
  46. * number of locations in sequence A that must be considered to find the LCS,
  47. * and helps maintain a lower running time bound.
  48. * <p>
  49. * So long as {@link #setMaxChainLength(int)} is a small constant (such as 64),
  50. * the algorithm runs in O(N * D) time, where N is the sum of the input lengths
  51. * and D is the number of edits in the resulting EditList. If the supplied
  52. * {@link org.eclipse.jgit.diff.SequenceComparator} has a good hash function,
  53. * this implementation typically out-performs
  54. * {@link org.eclipse.jgit.diff.MyersDiff}, even though its theoretical running
  55. * time is the same.
  56. * <p>
  57. * This implementation has an internal limitation that prevents it from handling
  58. * sequences with more than 268,435,456 (2^28) elements.
  59. */
  60. public class HistogramDiff extends LowLevelDiffAlgorithm {
  61. /** Algorithm to use when there are too many element occurrences. */
  62. DiffAlgorithm fallback = MyersDiff.INSTANCE;
  63. /**
  64. * Maximum number of positions to consider for a given element hash.
  65. *
  66. * All elements with the same hash are stored into a single chain. The chain
  67. * size is capped to ensure search is linear time at O(len_A + len_B) rather
  68. * than quadratic at O(len_A * len_B).
  69. */
  70. int maxChainLength = 64;
  71. /**
  72. * Set the algorithm used when there are too many element occurrences.
  73. *
  74. * @param alg
  75. * the secondary algorithm. If null the region will be denoted as
  76. * a single REPLACE block.
  77. */
  78. public void setFallbackAlgorithm(DiffAlgorithm alg) {
  79. fallback = alg;
  80. }
  81. /**
  82. * Maximum number of positions to consider for a given element hash.
  83. *
  84. * All elements with the same hash are stored into a single chain. The chain
  85. * size is capped to ensure search is linear time at O(len_A + len_B) rather
  86. * than quadratic at O(len_A * len_B).
  87. *
  88. * @param maxLen
  89. * new maximum length.
  90. */
  91. public void setMaxChainLength(int maxLen) {
  92. maxChainLength = maxLen;
  93. }
  94. /** {@inheritDoc} */
  95. @Override
  96. public <S extends Sequence> void diffNonCommon(EditList edits,
  97. HashedSequenceComparator<S> cmp, HashedSequence<S> a,
  98. HashedSequence<S> b, Edit region) {
  99. new State<>(edits, cmp, a, b).diffRegion(region);
  100. }
  101. private class State<S extends Sequence> {
  102. private final HashedSequenceComparator<S> cmp;
  103. private final HashedSequence<S> a;
  104. private final HashedSequence<S> b;
  105. private final List<Edit> queue = new ArrayList<>();
  106. /** Result edits we have determined that must be made to convert a to b. */
  107. final EditList edits;
  108. State(EditList edits, HashedSequenceComparator<S> cmp,
  109. HashedSequence<S> a, HashedSequence<S> b) {
  110. this.cmp = cmp;
  111. this.a = a;
  112. this.b = b;
  113. this.edits = edits;
  114. }
  115. void diffRegion(Edit r) {
  116. diffReplace(r);
  117. while (!queue.isEmpty())
  118. diff(queue.remove(queue.size() - 1));
  119. }
  120. private void diffReplace(Edit r) {
  121. Edit lcs = new HistogramDiffIndex<>(maxChainLength, cmp, a, b, r)
  122. .findLongestCommonSequence();
  123. if (lcs != null) {
  124. // If we were given an edit, we can prove a result here.
  125. //
  126. if (lcs.isEmpty()) {
  127. // An empty edit indicates there is nothing in common.
  128. // Replace the entire region.
  129. //
  130. edits.add(r);
  131. } else {
  132. queue.add(r.after(lcs));
  133. queue.add(r.before(lcs));
  134. }
  135. } else if (fallback instanceof LowLevelDiffAlgorithm) {
  136. LowLevelDiffAlgorithm fb = (LowLevelDiffAlgorithm) fallback;
  137. fb.diffNonCommon(edits, cmp, a, b, r);
  138. } else if (fallback != null) {
  139. SubsequenceComparator<HashedSequence<S>> cs = subcmp();
  140. Subsequence<HashedSequence<S>> as = Subsequence.a(a, r);
  141. Subsequence<HashedSequence<S>> bs = Subsequence.b(b, r);
  142. EditList res = fallback.diffNonCommon(cs, as, bs);
  143. edits.addAll(Subsequence.toBase(res, as, bs));
  144. } else {
  145. edits.add(r);
  146. }
  147. }
  148. private void diff(Edit r) {
  149. switch (r.getType()) {
  150. case INSERT:
  151. case DELETE:
  152. edits.add(r);
  153. break;
  154. case REPLACE:
  155. if (r.getLengthA() == 1 && r.getLengthB() == 1)
  156. edits.add(r);
  157. else
  158. diffReplace(r);
  159. break;
  160. case EMPTY:
  161. default:
  162. throw new IllegalStateException();
  163. }
  164. }
  165. private SubsequenceComparator<HashedSequence<S>> subcmp() {
  166. return new SubsequenceComparator<>(cmp);
  167. }
  168. }
  169. }