Cache user global and system-wide git configurations
So far the git configuration and the system wide git configuration were
always reloaded when jgit accessed these global configuration files to
access global configuration options which are not in the context of a
single git repository. Cache these configurations in SystemReader and
only reload them if their file metadata observed using FileSnapshot
indicates a modification.
Change-Id: I092fe11a5d95f1c5799273cacfc7a415d0b7786c
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Avoid setup and saving FileStoreAttributes compete for ~/.gitconfig lock
FS determines FileStore attributes in a background thread and tries to
save the results to the global git configuration. This competed with
LocalDiskRepositoryTestCase#setup trying to save changes to the same
file requiring the same lock. This frequently led to one of the threads
failing to acquire the lock.
Fix this by first initiating determination of FileStore attributes which
then uses a MockSystemReader not using a userConfig stored to disk which
avoids this race for the lock.
Change-Id: I30fcd96bc15100f8ef9b2a9eb3320bb5ace97c67
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
FS#getFileStoreAttributes used the real userConfig and not the mocked
one. This led to test errors when running tests with Bazel since it
sandboxes tests which prevents they can write to ~/.gitconfig.
Fix this by first preparing the MockedSystemReader and the mocked config
before calling FS#getFileStoreAttributes.
Also fix ConfigTest which broke due to this change since it inherits
from LocalDiskRepositoryTestCase and calls its setup method which was
changed here. We can no longer assert by comparing plain text since FS
adds FileStoreAttributes to the mocked userConfig. Also the default
options seen by this test changed since we now use a mocked config.
Change-Id: I76bc7c94953fe979266147d3b309a68dda9d4dfe
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Override FileBasedConfig's save method in MockConfig
This ensures we don't try to persist MockConfig using its superclasses
save() method which fails with an NPE since MockConfig has no backing
file.
Change-Id: Ifba2d24c9438bb30d3828ed31a4c131f940b45eb
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Persist minimal racy threshold and allow manual configuration
To enable persisting the minimal racy threshold per FileStore add a
new config option to the user global git configuration:
- Config section is "filesystem"
- Config subsection is concatenation of
- Java vendor (system property "java.vendor")
- Java version (system property "java.version")
- FileStore's name, on Windows we use the attribute volume:vsn instead
since the name is not necessarily unique.
- separated by '|'
e.g.
"AdoptOpenJDK|1.8.0_212-b03|/dev/disk1s1"
The same prefix is used as for filesystem timestamp resolution, so
both values are stored in the same config section
- The config key for minmal racy threshold is "minRacyThreshold" as a
time value, supported time units are those supported by
DefaultTypedConfigGetter#getTimeUnit
- measure for 3 seconds to limit runtime which depends on hardware, OS
and Java version being used
If the minimal racy threshold is configured for a given FileStore the
configured value is used instead of measuring it.
When the minimal racy threshold was measured it is persisted in the user
global git configuration.
Rename FileStoreAttributeCache to FileStoreAttributes since this class
is now declared public in order to enable exposing all attributes in one
object.
Example:
[filesystem "AdoptOpenJDK|11.0.3|/dev/disk1s1"]
timestampResolution = 7000 nanoseconds
minRacyThreshold = 3440 microseconds
Change-Id: I22195e488453aae8d011b0a8e3276fe3d99deaea
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Also-By: Marc Strapetz <marc.strapetz@syntevo.com>
Measure minimum racy interval to auto-configure FileSnapshot
By running FileSnapshotTest#detectFileModified we found that the sum of
measured filesystem timestamp resolution and measured clock resolution
may yield a too small interval after a file has been modified which we
need to consider racily clean. In our tests we didn't find this behavior
on all systems we tested on, e.g. on MacOS using APFS and Java 8 and 11
this effect was not observed.
On Linux (SLES 15, kernel 4.12.14-150.22-default) we collected the
following test results using Java 8 and 11:
In 23-98% of 10000 test runs (depending on filesystem type and Java
version) the test failed, which means the effective interval which needs
to be considered racily clean after a file was modified is larger than
the measured file timestamp resolution.
"delta" is the observed interval after a file has been modified but
FileSnapshot did not yet detect the modification:
"resolution" is the measured sum of file timestamp resolution and clock
resolution seen in Java.
Java version filesystem failures resolution min delta max delta
1.8.0_212-b04 btrfs 98.6% 1 ms 3.6 ms 6.6 ms
1.8.0_212-b04 ext4 82.6% 3 ms 1.1 ms 4.1 ms
1.8.0_212-b04 xfs 23.8% 4 ms 3.7 ms 3.9 ms
1.8.0_212-b04 zfs 23.1% 3 ms 4.8 ms 5.0 ms
11.0.3+7 btrfs 98.1% 3 us 0.7 ms 4.7 ms
11.0.3+7 ext4 98.1% 6 us 0.7 ms 4.7 ms
11.0.3+7 xfs 98.5% 7 us 0.1 ms 8.0 ms
11.0.3+7 zfs 98.4% 7 us 0.7 ms 5.2 ms
Mac OS
1.8.0_212 APFS 0% 1 s
11.0.3+7 APFS 0% 6 us
The observed delta is not distributed according to a normal gaussian
distribution but rather random in the observed range between "min delta"
and "max delta".
Run this test after measuring file timestamp resolution in
FS.FileAttributeCache to auto-configure JGit since it's unclear what
mechanism is causing this effect.
In FileSnapshot#isRacyClean use the maximum of the measured timestamp
resolution and the measured "delta" as explained above to decide if a
given FileSnapshot is to be considered racily clean. Add a 30% safety
margin to ensure we are on the safe side.
Change-Id: I1c8bb59f6486f174b7bbdc63072777ddbe06694d
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Reuse FileUtils to recursively delete files created by tests
Replace redundant complex implementation of recursive delete by the one
in FileUtils.
Change-Id: Iced1468b96c4f32381a9cf0c651b2bf6a9a9af35
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Enhance RepeatRule to report number of failures at the end
In order to enable counting how frequently a test fails if repeated add
option abortOnFailure. If it is true the test aborts on the first
failure. Otherwise it runs the configured number of repetitions and, if
there was any failure, throws a RepeatException reporting how many of
the test repetitions failed.
Change-Id: Ic47de44d4a6273fddf04b9993ad989903efb40c3
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Measure filesystem timestamp resolution already in test setup
This helps to avoid some time critical tests can't prepare the test
fixture intended since measuring timestamp resolution takes time.
Change-Id: Ib34023e682a106070ca97e98ef16789a4dfb97b4
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Use Instant instead of milliseconds for filesystem timestamp handling
This enables higher file timestamp resolution on filesystems like ext4,
Mac APFS (1ns) or NTFS (100ns) providing high timestamp resolution on
filesystem level.
Note:
- on some OSes Java 8,9 truncate milliseconds, see
https://bugs.openjdk.java.net/browse/JDK-8177809, fixed in Java 10
- UnixFileAttributes truncates timestamp resolution to microseconds when
converting the internal representation to FileTime exposed in the API,
see https://bugs.openjdk.java.net/browse/JDK-8181493
- WindowsFileAttributes also provides only microsecond resolution
Change-Id: I25ffff31a3c6f725fc345d4ddc2f26da3b88f6f2
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
As reported by Error Prone:
An inner class should be static unless it references members of its
enclosing class. An inner class that is made non-static unnecessarily
uses more memory and does not make the intent of the class clear.
See https://errorprone.info/bugpattern/ClassCanBeStatic
Change-Id: Ib99d120532630dba63cf400cc1c61c318286fc41
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
(cherry picked from commit ee40efcea4)
Enhance fsTick() to use filesystem timer resolution
RepositoryTestCase.fsTick() was was waiting 64, 128, 256, ... milliseconds
until it detected that the filesystem timer has ticked. Make use of
the filesystemtimer resolution information in FS to sleep a fraction
of the filesystem timer resolution. That raises probability to wake up
shortly after the filesystem timer has ticked.
Change-Id: Ibcc38576e42ece13b2fd4423a29c459eed167a69
Measure file timestamp resolution used in FileSnapshot
FileSnapshot.notRacyClean() assumed a worst case filesystem timestamp
resolution of 2.5 sec (FAT has a resolution of 2 sec). Instead measure
timestamp resolution to avoid unnecessary IO caused by false positives
in detecting the racy git problem caused by finite filesystem timestamp
resolution [1].
Cache the measured resolution per FileStore since timestamp resolution
depends on the respective filesystem type. If timestamp resolution
cannot be measured or fails due to an exception fallback to the worst
case FAT timestamp resolution and avoid caching this value.
Add a 10% safety margin in FileSnapshot.notRacyClean(), though running
FsTest.testFsTimestampResolution() 1000 times which is not using a
safety margin didn't fail on Mac using APFS and Java 8, 11, 12.
Measured Java file timestamp resolution: [2]
[1] https://github.com/git/git/blob/master/Documentation/technical/racy-git.txt
[2] https://docs.google.com/spreadsheets/d/1imy0y6WmRqBf0kjCxzxj2X7M50eIVfa7oaUIzEOHmjo
Bug: 546891
Change-Id: I493f3b57b6b306285ffa7d392339d253e5966ab8
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Move SshTestGitServer to new bundle org.eclipse.jgit.junit.ssh
Create the bundle and move the SshTestGitServer there. Verified that
the Eclipse build still works and ran JSchSshTest and ApacheSshTest as
junit tests inside Eclipse.
Update maven build and features to account for that. Verified by
running full maven build including packaging.
Update bazel build files to account for that. Verified by a
clean-slate bazel build :all, followed by running the JSchSshTest
and the ApacheSshTest via bazel.
Change-Id: Ia084942f4425b454529de148e00417e7da786a90
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Apache MINA sshd client: properly handle HostKeyAlgorithms config
By default sshd will use its default built-in list, which matches
the one of openssh (as far as the algorithms exist in sshd at all).
But it doesn't handle HostKeyAlgorithms from the ssh config at all.
Implement this as in openssh, including the '+' and '-' modifiers
and reordering the default if there are known host keys for a
server already.
Add tests for the reordering.
Also use a more robust reader for the known hosts file. The default
aborts on the first error.
Bug: 520927
Change-Id: Ib1684440bfe2e96140536aa1a93c4bd4a0d35916
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Apache MINA sshd client: add gssapi-with-mic authentication
sshd does support gssapi-with-mic on the server side, but has no
built-in client-side support for this authentication mechanism.
Add our own implementation for it, following RFC 4462.[1] To avoid
needlessly re-trying mechanisms that aren't even configured on the
client, we disable mechanisms that fail on the very first attempt
to use them.
Since we have no real Kerberos5 test setup, this cannot be fully
tested in CI. The disabling of the authentication mechanism and
that it is skipped when not successful _is_ tested.
[1] https://www.ietf.org/rfc/rfc4462.txt
Bug: 520927
Change-Id: I5d0cdb14103588a57c52f927df541b589ab88d88
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Add more ssh tests: pushing, known_host file handling, etc.
Add support for git-receive-pack to the ssh git server and add two
new tests for pushing.
This actually uncovered an undocumented requirement in TransportSftp:
the FTP rename operation assumes POSIX semantics, i.e., that the
target is removed. This works as written only for servers that
support and advertise the "posix-rename@openssh.com" FTP extension.
Our little Apache MINA server does not advertise this extension.
Fix the FtpChannel implementation for Jsch to handle this case in a
meaningful way so that it can pass the new "push over sftp" test.
Add more tests to test the behavior of server host key checking.
Also refactor the tests generally to separate better the test
framework from the actual tests.
Bug: 520927
Change-Id: Ia4bb85e17ddacde7b36ee8c2d5d454bbfa66dfc3
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Ssh tests with an Apache MINA sshd test git server
Add a simple ssh git server based on Apache MINA sshd, and use it
in new tests that verify ssh operations and in particular a number
of bugs that had cropped up over time in JSch.
The git server supports fetching only, and sftp access.
The tests are all in an abstract base class; the concrete JschSshTest
class only provides ssh-specific test setup. So the same tests could
be run easily also with some other ssh client.
Bug: 520927
Change-Id: Ide6687b717fb497a29fc83f22b07390a26dfce1d
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
As reported by Error Prone:
An inner class should be static unless it references members of its
enclosing class. An inner class that is made non-static unnecessarily
uses more memory and does not make the intent of the class clear.
See https://errorprone.info/bugpattern/ClassCanBeStatic
Change-Id: Ib99d120532630dba63cf400cc1c61c318286fc41
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Return parsed objects from TestRepository.commit/tree/blob()
It is convenient for TestRepository to return fully parsed
objects from its commit()/tree()/blob() methods, so that test
code doesn't have to remember to parse them before making
assertions about them.
Update TestRepostiory to return fully parsed objects.
Adjust the tests that are affected by this change in behavior.
Change-Id: I09d03d0c80ad22cb7092f4a2eaed99d40a10af63
Signed-off-by: Terry Parker <tparker@google.com>
Fix trivial usages of deprecated Repository#getAllRefs
Callers of getAllRefs that only iterate over the `values()` of the
returned map can be trivially fixed to call getRefDatabase().getRefs()
instead.
Only fix those where the calling method is already declared to throw
IOException, to avoid potential API changes.
Change-Id: I2b05f785077a1713953cfd42df7bf915f889f90b
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Remove it from
* package private functions.
* try blocks
* for loops
this was done with the following python script:
$ cat f.py
import sys
import re
import os
def replaceFinal(m):
return m.group(1) + "(" + m.group(2).replace('final ', '') + ")"
methodDecl = re.compile(r"^([\t ]*[a-zA-Z_ ]+)\(([^)]*)\)")
def subst(fn):
input = open(fn)
os.rename(fn, fn + "~")
dest = open(fn, 'w')
for l in input:
l = methodDecl.sub(replaceFinal, l)
dest.write(l)
dest.close()
for root, dirs, files in os.walk(".", topdown=False):
for f in files:
if not f.endswith('.java'):
continue
full = os.path.join(root, f)
print full
subst(full)
Change-Id: If533a75a417594fc893e7c669d2c1f0f6caeb7ca
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Open auto-closeable resources in try-with-resource
When an auto-closeable resources is not opened in try-with-resource,
the warning "should be managed by try-with-resource" is emitted by
Eclipse.
Fix the ones that can be silenced simply by moving the declaration of
the variable into a try-with-resource.
In cases where we explicitly call the close() method, for example in
tests where we are testing specific behavior caused by the close(),
suppress the warning.
Leave the ones that will require more significant refcactoring to fix.
They can be done in separate commits that can be reviewed and tested
in isolation.
Change-Id: I9682cd20fb15167d3c7f9027cecdc82bc50b83c4
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Replace hard-coded "UTF-8" string with the constant.
Change-Id: Ie812add2df28e984090563ec7c6e2c0366616424
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Merges are performed using the raw text as stored in the git
repository. When we write the merge result, we must apply the
correct CRLF settings. Otherwise the line endings in the result
will be wrong.
Bug: 499615
Change-Id: I37a9b987e9404c97645d2720cd1c7c04c076a96b
Signed-off-by: Thomas Wolf <thomas.wolf@paranor.ch>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Use constants from StandardCharsets instead of hard-coded strings
Instead of hard-coding the charset strings "US-ASCII", "UTF-8", and
"ISO-8859-1", use the corresponding constants from StandardCharsets.
UnsupportedEncodingException is not thrown when the StandardCharset
constants are used, so remove the now redundant handling.
Because the encoding names are no longer hard-coded strings, also
remove redundant $NON-NLS warning suppressions.
Also replace existing usages of the constants with static imports.
Change-Id: I0a4510d3d992db5e277f009a41434276f95bda4e
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Add flag for keeping ref tombstones in GC reftable
A tombstone will prevent a delayed reference update from resurrecting the
deleted reference.
Change-Id: Id9f4df43d435a299ff16cef614821439edef9b11
Signed-off-by: Minh Thai <mthai@google.com>
So far, in order to get the pack directory it was necessary to resolve
it from the object directory. This resolution is already done when
creating the object directory, so simplify the call by just adding a
getter to the pack directory.
Change-Id: I69e783141dc6739024e8b3d5acc30843edd651a7
Signed-off-by: Hector Caballero <hector.caballero@ericsson.com>
JGit already had some fsck-like classes like ObjectChecker which can
check for an individual object.
The read-only FsckPackParser which will parse all objects within a pack
file and check it with ObjectChecker. It will also check the pack index
file against the object information from the pack parser.
Change-Id: Ifd8e0d28eb68ff0b8edd2b51b2fa3a50a544c855
Signed-off-by: Zhen Chen <czhen@google.com>
Run with @Parameterized, so we don't have to duplicate test setup for
each atomic/non-atomic test. We still have to have two different sets of
asserts for the cases where the behavior is different. In fact, this is
a readability win: it emphasizes that performing the exact same setup
except for the atomic setting will have different behavior.
Change-Id: I78a8214075e204732a423341f14c09de273a7854
When running an automatic GC on a FileRepository, when the caller
passes a NullProgressMonitor, run the GC in a background thread. Use a
thread pool of size 1 to limit the number of background threads spawned
for background gc in the same application. In the next minor release we
can make the thread pool configurable.
In some cases, the auto GC limit is lower than the true number of
unreachable loose objects, so auto GC will run after every (e.g) fetch
operation. This leads to the appearance of poor fetch performance.
Since these GCs will never make progress (until either the objects
become referenced, or the two week timeout expires), blocking on them
simply reduces throughput.
In the event that an auto GC would make progress, it's still OK if it
runs in the background. The progress will still happen.
This matches the behavior of regular git.
Git (and now jgit) uses the lock file for gc.log to prevent simultaneous
runs of background gc. Further, it writes errors to gc.log, and won't
run background gc if that file is present and recent. If gc.log is too
old (according to the config gc.logexpiry), it will be ignored.
Change-Id: I3870cadb4a0a6763feff252e6eaef99f4aa8d0df
Signed-off-by: David Turner <dturner@twosigma.com>
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Enable and fix warnings about redundant specification of type arguments
Since the introduction of generic type parameter inference in Java 7,
it's not necessary to explicitly specify the type of generic parameters.
Enable the warning in Eclipse, and fix all occurrences.
Change-Id: I9158caf1beca5e4980b6240ac401f3868520aad0
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
LocalDiskRepositoryTestCase: Add clarifying comment in call to createRepository
Clarify that 'true' means 'auto close'. This makes it consistent with
other calls that have a boolean argument for 'bare'. It also makes it a
bit easier to see what's going on while stepping in the debugger, because
it's not necessary to scroll around to find the method declaration.
Change-Id: Idacd749407dcfd258af3efaaf44d129069925dd3
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
RepositoryCacheTest: avoid to close already closed repository
The tearDown() of the superclass closed the repository once more which
led to a negative use count warning logged by Repository.close().
Change-Id: I331f85a540c68264a53456276c32f72b79113d61
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
LocalDiskRepositoryTestCase: Only add to toClose through access method
Only using the access method means we only have one place where the
toClose set is modified, making it easier to debug either by adding
log statements or by setting a breakpoint.
Change-Id: I4f9f1774d5f2e10bcab381edfd84bb6ee0499a11
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
LocalDiskRepositoryTestCase: Prevent duplicates in list of repos to close
Change the "toClose" list to a set, which will not allow duplicate
entries. This reduces the number of false positive logs about corrupt
use count due to the same repository being closed more than once during
teardown.
Change-Id: I5ab0ff8b56e7f2b2c7aab5274d957708d26f42c5
Signed-off-by: David Pursehouse <david.pursehouse@gmail.com>
Define MonotonicClock interface for advanced timestamps
MonotonicClock can be implemented to provide more certainity about
time than the standard System.currentTimeMillis() can provide. This
can be used by classes such as PersonIdent and Ketch to rely on
more certainity about time moving in a strictly ascending order.
Gerrit Code Review can also leverage this interface through its
embedding of JGit and use MonotonicClock and ProposedTimestamp to
provide stronger assurance that NoteDb time is moving forward.
Change-Id: I1a3cbd49a39b150a0d49b36d572da113ca83a786
Java 8 fixed the silent flush during close issue by
FilterOutputStream (base class of BufferedOutputStream)
using try-with-resources to close the stream, getting a
behavior matching what JGit's SafeBufferedOutputStream
was doing:
try {
flush();
} finally {
out.close();
}
With Java 8 as the minimum required version to run JGit
it is no longer necessary to override close() or have
this class. Deprecate the class, and use the JRE's version
of close.
Change-Id: Ic0584c140010278dbe4062df2e71be5df9a797b3
A JUnit TestRule which enables to run the same JUnit test repeatedly.
This may help to identify the root cause why a flaky tests which succeed
most often does fail sometimes.
Add the RepeatRule to the test class containing the test to be repeated:
public class MyTest {
@Rule
public RepeatRule repeatRule = new RepeatRule();
...
}
and annotate the test to be repeated with the @Repeat(n=<repetitions>)
annotation:
@Test
@Repeat(n = 100)
public void test() {
...
}
then this test will be repeated 100 times. If any test execution fails
test repetition will be stopped.
Change-Id: I7c49ccebe1cb00bcde6b002b522d95c13fd3a35e
Signed-off-by: Matthias Sohn <matthias.sohn@sap.com>
Matthias Sohn
David Pursehouse
Christian Halstrick
Thomas Wolf
Terry Parker
Han-Wen Nienhuys
Minh Thai
Hector Caballero
Zhen Chen
Dave Borowitz
David Turner
Shawn Pearce