1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
|
/*
* SonarQube, open source software quality management tool.
* Copyright (C) 2008-2014 SonarSource
* mailto:contact AT sonarsource DOT com
*
* SonarQube is free software; you can redistribute it and/or
* modify it under the terms of the GNU Lesser General Public
* License as published by the Free Software Foundation; either
* version 3 of the License, or (at your option) any later version.
*
* SonarQube is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with this program; if not, write to the Free Software Foundation,
* Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
*/
package org.sonar.batch.index;
import org.apache.commons.codec.binary.Hex;
import org.apache.commons.codec.digest.DigestUtils;
import org.apache.ibatis.session.ResultContext;
import org.apache.ibatis.session.ResultHandler;
import org.sonar.api.batch.fs.InputFile;
import org.sonar.api.batch.fs.internal.DefaultInputFile;
import org.sonar.api.utils.System2;
import org.sonar.batch.ProjectTree;
import org.sonar.batch.scan.filesystem.FileMetadata;
import org.sonar.batch.scan.filesystem.FileMetadata.LineHashConsumer;
import org.sonar.batch.scan.filesystem.InputFileMetadata;
import org.sonar.batch.scan.filesystem.InputPathCache;
import org.sonar.core.persistence.DbSession;
import org.sonar.core.persistence.MyBatis;
import org.sonar.core.source.db.FileSourceDto;
import org.sonar.core.source.db.FileSourceMapper;
import javax.annotation.CheckForNull;
import javax.annotation.Nullable;
import java.io.IOException;
import java.util.HashMap;
import java.util.Map;
public class SourcePersister implements ScanPersister {
private final MyBatis mybatis;
private final System2 system2;
private final ProjectTree projectTree;
private final ResourceCache resourceCache;
private final InputPathCache inputPathCache;
private final SourceDataFactory dataFactory;
public SourcePersister(InputPathCache inputPathCache, MyBatis mybatis, System2 system2,
ProjectTree projectTree, ResourceCache resourceCache, SourceDataFactory dataFactory) {
this.inputPathCache = inputPathCache;
this.mybatis = mybatis;
this.system2 = system2;
this.projectTree = projectTree;
this.resourceCache = resourceCache;
this.dataFactory = dataFactory;
}
@Override
public void persist() {
// Don't use batch insert for file_sources since keeping all data in memory can produce OOM for big files
try (DbSession session = mybatis.openSession(false)) {
final Map<String, FileSourceDto> previousDtosByUuid = new HashMap<>();
session.select("org.sonar.core.source.db.FileSourceMapper.selectHashesForProject", projectTree.getRootProject().getUuid(), new ResultHandler() {
@Override
public void handleResult(ResultContext context) {
FileSourceDto dto = (FileSourceDto) context.getResultObject();
previousDtosByUuid.put(dto.getFileUuid(), dto);
}
});
FileSourceMapper mapper = session.getMapper(FileSourceMapper.class);
for (InputFile inputFile : inputPathCache.allFiles()) {
persist(session, mapper, (DefaultInputFile) inputFile, previousDtosByUuid);
}
} catch (Exception e) {
throw new IllegalStateException("Unable to save file sources", e);
}
}
private void persist(DbSession session, FileSourceMapper mapper, DefaultInputFile inputFile, Map<String, FileSourceDto> previousDtosByUuid) {
String fileUuid = resourceCache.get(inputFile.key()).resource().getUuid();
InputFileMetadata metadata = inputPathCache.getFileMetadata(inputFile.moduleKey(), inputFile.relativePath());
byte[] data = computeData(inputFile, metadata);
String dataHash = DigestUtils.md5Hex(data);
FileSourceDto previousDto = previousDtosByUuid.get(fileUuid);
if (previousDto == null) {
FileSourceDto dto = new FileSourceDto()
.setProjectUuid(projectTree.getRootProject().getUuid())
.setFileUuid(fileUuid)
.setBinaryData(data)
.setDataHash(dataHash)
.setSrcHash(metadata.hash())
.setLineHashes(lineHashesAsMd5Hex(inputFile))
.setCreatedAt(system2.now())
.setUpdatedAt(0L);
mapper.insert(dto);
session.commit();
} else {
// Update only if data_hash has changed or if src_hash is missing (progressive migration)
if (!dataHash.equals(previousDto.getDataHash()) || !metadata.hash().equals(previousDto.getSrcHash())) {
previousDto
.setBinaryData(data)
.setDataHash(dataHash)
.setSrcHash(metadata.hash())
.setLineHashes(lineHashesAsMd5Hex(inputFile));
// Optimization do not change updated at when updating src_hash to avoid indexation by E/S
if (!dataHash.equals(previousDto.getDataHash())) {
previousDto.setUpdatedAt(0L);
}
mapper.update(previousDto);
session.commit();
}
}
}
@CheckForNull
private String lineHashesAsMd5Hex(DefaultInputFile f) {
if (f.lines() == 0) {
return null;
}
// A md5 string is 32 char long + '\n' = 33
final StringBuilder result = new StringBuilder(f.lines() * (32 + 1));
FileMetadata.computeLineHashesForIssueTracking(f, new LineHashConsumer() {
@Override
public void consume(int lineIdx, @Nullable byte[] hash) {
if (lineIdx > 1) {
result.append("\n");
}
result.append(hash != null ? Hex.encodeHexString(hash) : "");
}
});
return result.toString();
}
private byte[] computeData(DefaultInputFile inputFile, InputFileMetadata metadata) {
try {
return dataFactory.consolidateData(inputFile, metadata);
} catch (IOException e) {
throw new IllegalStateException("Fail to read file " + inputFile, e);
}
}
}
|
